| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_22250 |
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| Symbol | |
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| ID | 4838963 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 561353 |
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| End bp | 562153 |
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| Gene Length | 801 bp |
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| Protein Length | 130 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390278 |
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| Product | predicted protein |
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| Protein accession | XP_001384069 |
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| Protein GI | 150865020 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5066] VAMP-associated protein involved in inositol metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.077918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAATCT CTCCTTCTGC CTTAGAGTTC AAGGGTATGT ATAATAACCG TTCTATGATC
TGGTCAGTTG AGGACATATG TGTTACCCCT ATAGACATCG ATCCAGAGAT ACTCCATATC
TCATCGAGAC AACAGACTAC ATATCATAAA CAGATTAATA TGGAATTATC GCAAGATGTA
CACCATATTC ATCGCATTGA TTGCACCCTC CATCCGTCCT CCATCCATCC TAGTAATCTG
CCATGAAATC AACTATGTAG TGAGATCAAT AATCACGTCT CATGCTAATC TCGCAATATC
AGTATTTGAA TCTGAAAGTC CTGAGAAATC TTGGAATTCA AACCACCACC AGAAAACAAC
TTGATCAATT CAAACCATAT AAACCTTAGG ACCATCCATC ACAATGATCA TCTTCATTTT
GCGTTGTCAA TACTAACATT TATAGGCTCC TTCACCAAGC AGTCTACTCA ATACTTGACT
CTTACCAATA CCACCAACTC CCCATTGGCC TTCAAAGTCA AGACCACGGC TCCAAAGTTG
TACTGTGTCA GACCCAATGC CTCGGTCATC GATCCTGGCC GTTCTGCCCA GATCTCCATC
ATCTTGCAAG GCTTCTCGCT GCCATTGCAG AAGGATTACA AATGCAAAGA CAAATTCTTG
ATTGTCTCGT TGCCATCGCC AGACGGCATC GATGCTTCCA AAATCGGTGA GTCCTGGGCC
TCCTTAGAAG CCAAGTACAA GCTGGAAGTT ATCTCCAAGA AGTTGAGAGT CAACTACGTC
ATTACAGAAG ACGAACCAGA T
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| Protein sequence | MEISPSALEF KGSFTKQSTQ YLTLTNTTNS PLAFKVKTTA PKLYCVRPNA SVIDPGRSAQ
ISIILQGFSS PLQKDYKCKD KFLIVSLPSP DGIDASKIGE SWASLEAKYK SEVISKKLRV
NYVITEDEPD
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