Gene PICST_17868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_17868 
SymbolIF4F1 
ID4838515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1093903 
End bp1094997 
Gene Length1095 bp 
Protein Length365 aa 
Translation table12 
GC content41% 
IMG OID640389830 
ProductEukaryotic initiation factor 4F subunit p150 (eIF4F p150) (eIF-4F p150) (mRNA cap-binding protein complex subunit p150) 
Protein accessionXP_001384511 
Protein GI126135974 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000259542 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.93221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GGTACTTCTG GCTCTTCTAG AGAAAAATCT ACTAGAAAGG GTAACCAATC CAAGAGAGGT 
GGAAGAGACT TCAGAGATAA AACTGAAGAA GAACCTCCTA AGCCTGCCGA AGACGTTAAG
CCTTTGGAAC AATCTGCTAA CAGATGGGTT CCAAGGTCCA GACAAAGTAA GAAGGAGACT
AAGGTTGCTG AAGATGGTAC CGAAATTTTG GAACCGGAAG ATGTAGAGAG AAAGGTGAAG
TCCTTATTGA ACAAGTTGAC TTTGGAAATG TTCGCACAAA TTACTGATGA TATGTTGAAG
ATCGCGTTCC AATCAAAGTG GGAAAAGGAT GCTGTTACCT TAAGAAGTAT CGTTTCCTTG
ACCTTTGCAA AGGCTTGTGA TGAACCATAC TGGTCGGAAA TGTACGCTAA GTTCTGTGCA
AAGATGTGTA CCAGTATACC GGCAGAAGTC GTTGATGAAT CTATAACTAT TAACGATGGT
CATCCATCTG GTGGTGATTT GGCGAGAAGA ATTTTGATCA CCACTTGCCA AACCGAATAT
GAAAAGGGTT GGGTTGATAA ATTACCAACA AACGAAGATG GATCCCCGTT GGAACCCGAA
ATGATGTCTG ATGAATATTA TGCCATGGCA GCTGCCAAGA GAAGAGGTCT TGGTTTGGTC
AAGTTTATCG GTCACTTGTA CAACTTAAAC ATGTTGAACG ATCAAGTTAT CTTCGTTTGT
TTGAGAGATC AATGTAAGAA CACTGTTGAT CCTTCTGAAG ATAGCTTGGA AAACTTGGTC
CAATTGGTCA AGACTGTTGG TCCTAAATTG GATGCTGATG AAAGAAAAAG AGCTATATTG
AAGATTGTTT TCGACAAGAT TGATGAAATC TTGAAGAATG TCAAGCTCTC TTCCAGAATC
ATGTTCATGT TGATGGATCT CCAAGATTTG AGAAAGTCCA AGTGGATTTC TACCAAGGCT
GACGCTGGTC CAAAGACAAT CGAAGAAATT CACAGAGATG CGGAGATTAA GAGAATGGAA
GATCAAAGAG CCAGTAATGA GAAGAAGCAA AGAAGAATAA ATGAAGGCAG ATCTAATTCC
TCTAGAGGTG GATCC
 
Protein sequence
GTSGSSREKS TRKGNQSKRG GRDFRDKTEE EPPKPAEDVK PLEQSANRWV PRSRQSKKET 
KVAEDGTEIL EPEDVERKVK SLLNKLTLEM FAQITDDMLK IAFQSKWEKD AVTLRSIVSL
TFAKACDEPY WSEMYAKFCA KMCTSIPAEV VDESITINDG HPSGGDLARR ILITTCQTEY
EKGWVDKLPT NEDGSPLEPE MMSDEYYAMA AAKRRGLGLV KFIGHLYNLN MLNDQVIFVC
LRDQCKNTVD PSEDSLENLV QLVKTVGPKL DADERKRAIL KIVFDKIDEI LKNVKLSSRI
MFMLMDLQDL RKSKWISTKA DAGPKTIEEI HRDAEIKRME DQRASNEKKQ RRINEGRSNS
SRGGS