Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_13009 |
Symbol | |
ID | 4838518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 1443380 |
End bp | 1443934 |
Gene Length | 555 bp |
Protein Length | 185 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389833 |
Product | predicted protein |
Protein accession | XP_001384236 |
Protein GI | 150865137 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000581836 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACGAG GTAATTGGAG TCTCTCAGCC GAGCTCAAGA AAAATGAACG AAAACAACAG CAGAAGGTAC AGAATAGACA GAAACAGCAA CACAAGAAGG TTAAACTCGC ATCCATAGAT CCTATACGGT TATATTATCA GATCCAGAGA CTTGAAAAGT CAGGTGAACT TTCAGACAGA GACCAGAAGT ACTTATACGG ACTCAAAGAG GACTGGGATT TCATTGTCAA GAACAATCTC CATCAGACAA AATTGAAGCC GTTTCTCGAA CAGGAACAAA AGAAAGAAAA GGTAAAGCAA TTGGAAAAGA CGAAGCTCCA TGGTCTGAAG TCTATCTACT TCAACCCAGA ATTAAATCCA CTAGGCAAGA TTCCCAATCC GGATGCTTTG CCAAACAAAC CTATTCATCC GTTGCCGAAC TTTACCAAGC CATTGAAGAA GGAGGACTTA GAAAAATACG CTGTAGACCC ACTAATCAAC CAATTGGGTA TTGTGGTACC AGAGGGAGAC CCACCTCGAT TCTACAAGTT GGTACAGAAT ACACAGAAAA AAAAT
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Protein sequence | MIRGNWSLSA ELKKNERKQQ QKVQNRQKQQ HKKVKLASID PIRLYYQIQR LEKSGELSDR DQKYLYGLKE DWDFIVKNNL HQTKLKPFLE QEQKKEKVKQ LEKTKLHGSK SIYFNPELNP LGKIPNPDAL PNKPIHPLPN FTKPLKKEDL EKYAVDPLIN QLGIVVPEGD PPRFYKLVQN TQKKN
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