Gene PICST_13009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_13009 
Symbol 
ID4838518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1443380 
End bp1443934 
Gene Length555 bp 
Protein Length185 aa 
Translation table12 
GC content41% 
IMG OID640389833 
Productpredicted protein 
Protein accessionXP_001384236 
Protein GI150865137 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000581836 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGAG GTAATTGGAG TCTCTCAGCC GAGCTCAAGA AAAATGAACG AAAACAACAG 
CAGAAGGTAC AGAATAGACA GAAACAGCAA CACAAGAAGG TTAAACTCGC ATCCATAGAT
CCTATACGGT TATATTATCA GATCCAGAGA CTTGAAAAGT CAGGTGAACT TTCAGACAGA
GACCAGAAGT ACTTATACGG ACTCAAAGAG GACTGGGATT TCATTGTCAA GAACAATCTC
CATCAGACAA AATTGAAGCC GTTTCTCGAA CAGGAACAAA AGAAAGAAAA GGTAAAGCAA
TTGGAAAAGA CGAAGCTCCA TGGTCTGAAG TCTATCTACT TCAACCCAGA ATTAAATCCA
CTAGGCAAGA TTCCCAATCC GGATGCTTTG CCAAACAAAC CTATTCATCC GTTGCCGAAC
TTTACCAAGC CATTGAAGAA GGAGGACTTA GAAAAATACG CTGTAGACCC ACTAATCAAC
CAATTGGGTA TTGTGGTACC AGAGGGAGAC CCACCTCGAT TCTACAAGTT GGTACAGAAT
ACACAGAAAA AAAAT
 
Protein sequence
MIRGNWSLSA ELKKNERKQQ QKVQNRQKQQ HKKVKLASID PIRLYYQIQR LEKSGELSDR 
DQKYLYGLKE DWDFIVKNNL HQTKLKPFLE QEQKKEKVKQ LEKTKLHGSK SIYFNPELNP
LGKIPNPDAL PNKPIHPLPN FTKPLKKEDL EKYAVDPLIN QLGIVVPEGD PPRFYKLVQN
TQKKN