| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_12458 |
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| Symbol | COP9 |
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| ID | 4838975 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 835642 |
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| End bp | 836340 |
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| Gene Length | 699 bp |
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| Protein Length | 218 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640390290 |
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| Product | COP9 signalosome subunit 5A / CSN subunit 5A (CSN5A) / c-JUN coactivator protein AJH2, putative (AJH2) |
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| Protein accession | XP_001384461 |
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| Protein GI | 150865305 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0331122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GAGGCGATCT ATAAACTTCC AGCTGCCAAC GAAATGTTGG CCAGTAAACG GCCGTGGAAG
ACGAATCCCA ACTATTTCAC CCATACCAAG ATTCTGGCTC TAGCACTCAT GAAAATGACG
ATCCATGCCC AGCGTGGAGG CTCCATAGAA GTTATGGGTA TGCTTACTGG TAAAATCACG
CACAAAACAA TTATAGTAAT GGATGTATAT CCACTTCCAG TAGAAGGAAC AGAGACGAGA
GTCAATGCAC AAGCTGAGGG GTACGAATAT ATGGTTCAGT ACTTGGAAGC CAATAAGAAG
ATAGGCAGAC ACGAGAATAT CGTAGGCTGG TATCATTCTC ATCCTGGGTA TGGGTGTTGG
TTATCTGGAA TTGATGTGAG TACTCAGGAG TTGAACCAGA ACTTCCAAGA TCCGTATTTG
GCACTTGTCA TTGATCCCAT CAAGACGTTG AAGCAGAACA AGGTTGAGAT CGGTGCCTTC
AGAACTTACT CTGAGGAGTA CGTCAATAAC CGTGATAATA ATAGTAACAG TGGAAGCAAC
AGCAAGAAGA AGAAAGAGCG AGGAGGTAGT AATGATTCTA GAAGTGTGCC CAAGTCGAAG
AGAAAAGATT TTGGAGTCCA TTCCGAACGG TACTATTCGC TAGACATAGA CATCTTCAAC
AGTGAACTCG ACAGCAAGAT CATTCTGATG CTCTTGAAT
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| Protein sequence | EAIYKLPAAN EMLASKRPWK TNPNYFTHTK ISALALMKMT IHAQRGGSIE VMGMLTGKIT
HKTIIVMDVY PLPVEGTETR VNAQAEGYEY MVQYLEANKK IGRHENIVGW YHSHPGYGCW
LSGIDVSTQE LNQNFQDPYL ALVIDPIKTL KQNKVEIGAF RTYSEEYKKK ERGGSNDSRS
VPKSKRKDFG VHSERYYSLD IDIFNSELDS KIISMLLN
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