| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88705 |
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| Symbol | LYS4 |
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| ID | 4838345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 1366157 |
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| End bp | 1368429 |
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| Gene Length | 2273 bp |
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| Protein Length | 677 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640389660 |
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| Product | homoaconitase |
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| Protein accession | XP_001383888 |
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| Protein GI | 150864886 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR00139] homoaconitase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.933626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.508507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAAGTTGAAA AATTAATAAT GGAATTTCAA TAATAGAAAG TTTGAAAATT TTAAACAGCT
TTTAGTTTTC TTCTTATTAC ACAACCATGC TAAGAGTCAA CATCAGAGGC CTAGCTACGT
CGGCTAGACT CCTTAGAGGT CAGAATCTTA CTGAAAAGAT CGTCCAAAGA TATGCTGTGA
ACCTACCTGC CGGAAAACAG GTCTTTAGTG GAGATTATGT CTCTATCAAG CCAGCCCATT
GTATGTCCCA CGACAACTCG TGGCCAGTAG CTACTAAGTT CATGGGTTTG GGAGCTACCA
AGGTCAAAGA TAATCGCCAG ATAGTGTGTA CCTTAGATCA CGATGTCCAG AACAAGCTGG
AAAAGAACTT GGAAAAGTAC AGAAATATCG AGCAGTTTGC TAAAGAACAG GGAATCGACT
TCTACCCAGC TGGAAGAGGT ATTGGTCATC AAATTATGAT TGAGGAAGGT TATGCCTTTC
CACTTAACTT GACTGTGGCT TCAGATTCGC ACTCCAACAC TTACGGAGGT GTAGGCTCTT
TGGGTACTCC GATCGTTAGA ACCGATGCCG CTTCGATCTG GGCTACGGGT CAGACGTGGT
GGCAGATTCC ACCTGTAGCC AAGGTGGAAT TGCAGGGTAA GCTTCCCGCC GGAGTCACCG
GTAAGGATAT CATCGTAGCA CTCTGCGGAG CGTTTAATAA AGATGAAGTG TTGAACCATG
CCATCGAATT TGTTGGAGAT GGGATCGAGC ACTTGTCTAT AGACTACAGA TTGACAATCG
CCAATATGAC CACTGAATGG GGAGCCCTTT CTGGTTTATT CCCTGTTGAT GCCCGTTTAT
TGGACTGGTA CCGTAGTGAG AGATTGGCCA AGTTGGGCTC AGGCCATCCC AGAGTGAACG
ATAAGACTGT TTCGGCGTTG GAAAAGAATC CAGTACAGAG TGACAGCGAC GCTGTCTACG
CCAAGCACTT GGTCGTGGAC TTGAGCTCAT TGACACCATA CATTTCTGGC CCCAACTCCG
TTAAGATCCT GAACTCATTG GCTGACTTGG TGGAGCAGGA TATCCCCATC AACAAGGCGT
ACTTGGTCAG TTGCACTAAT TCGAGATTGA GCGATATCCA AGCTGCTGCT GATGTCATCC
GTGGCCACAA GGTTGCCCCT GGTGTAGAGT TCTATGTAGC TGCAGCTTCT TCTAACGTCC
AGAAGGATGC GGAGGCTGCT GGTGCCTGGA AAACCATCTT GGAAGCTGGT GCAAAGCCTT
TGCCAGCTGG CTGCGGTCCC TGCATTGGAC TTGGTACTGG TTTGTTGAAG GACGGAGAAG
TCGGTATATC TGCTACCAAT CGTAACTTCA AGGGTAGAAT GGGCTCCAAG GATGCCTTGG
CTTACTTGGC TTCTCCTGAA GTTGTTGCAG CCTCTGCTGT CTTGGGTAGA ATTGGTGGTC
CGCAGGAATT GGAGGGAAAA TCTGTTCTCT CTACCAGAGA GATCATAAAG ACTATTGAAG
AAACTAAAGT TTCTGAAGAT GCTGCTACTG GTGGTGCTGT TGAAGTCTTG GAAGGATTCC
CTAAGGTTAT CGAAGGCGAG TTAATTCTCT GTGATGCTGA CAACATCAAC ACAGATGGTA
TCTACCCCGG TAAGTACACC TACCAGGATG ATATACCTCG TGAAAAGATG GCTGAGGTCT
GTATGGAAAA CTACGATGCT GAATTTAACG GCAAGACCAA GGCTGGCGAT ATCATCATAA
GTGGCTACAA CTTCGGTACT GGATCGTCTC GTGAACAGGC TGCCACTGCA ATTTTGGCCA
GAGGAATGAA GTTGGTTGTT GCTGGTTCCT TCGGTAACAT CTTCCTGAGA AATTCCATCA
ACAACGCTTT GTTGACGTTG GAAATCCCCG ACTTGATCAA CAACTTGAGA GCTAAGTACG
CCGGTTCAGA CGAGTTGACT GTCCGCACAG GCTGGATCCT CAAGTGGGAT GTCACTACTG
CTACTGTCGA AGTCAAAGAC AGCGAAGGCA ACGTGGTGTT GAAGCAGAAG GTCGGTGAAT
TGGGTACCAA TCTTCAGGAC ATCATTGTCA AGGGAGGTCT TGAAGGTTGG GTCAGAAGTG
AGTTGAAGGC AGGTGCTTGA GCCAGAAGAA AGAGAACTAC ACTCTACATT AGCATAGGAT
GCTGCGGACT GTACGGTTCG TCAGTGTTAC TCCCATAGTA TTCGTATAAA AAAGAATAGC
TATCTTCACT AAAGAAGAAA ATTATAGTCA ATACATTTAA AGAATTTCAT CAG
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| Protein sequence | MLRVNIRGLA TSARLLRGQN LTEKIVQRYA VNLPAGKQVF SGDYVSIKPA HCMSHDNSWP
VATKFMGLGA TKVKDNRQIV CTLDHDVQNK SEKNLEKYRN IEQFAKEQGI DFYPAGRGIG
HQIMIEEGYA FPLNLTVASD SHSNTYGGVG SLGTPIVRTD AASIWATGQT WWQIPPVAKV
ELQGKLPAGV TGKDIIVALC GAFNKDEVLN HAIEFVGDGI EHLSIDYRLT IANMTTEWGA
LSGLFPVDAR LLDWYRSERL AKLGSGHPRV NDKTVSALEK NPVQSDSDAV YAKHLVVDLS
SLTPYISGPN SVKISNSLAD LVEQDIPINK AYLVSCTNSR LSDIQAAADV IRGHKVAPGV
EFYVAAASSN VQKDAEAAGA WKTILEAGAK PLPAGCGPCI GLGTGLLKDG EVGISATNRN
FKGRMGSKDA LAYLASPEVV AASAVLGRIG GPQELEGKSV LSTREIIKTI EETKVSEDAA
TGGAVEVLEG FPKVIEGELI LCDADNINTD GIYPGKYTYQ DDIPREKMAE VCMENYDAEF
NGKTKAGDII ISGYNFGTGS SREQAATAIL ARGMKLVVAG SFGNIFSRNS INNALLTLEI
PDLINNLRAK YAGSDELTVR TGWILKWDVT TATVEVKDSE GNVVLKQKVG ELGTNLQDII
VKGGLEGWVR SELKAGA
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