| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88690 |
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| Symbol | |
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| ID | 4838125 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 492599 |
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| End bp | 495499 |
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| Gene Length | 2901 bp |
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| Protein Length | 629 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640389440 |
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| Product | predicted protein |
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| Protein accession | XP_001383729 |
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| Protein GI | 150864761 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5354] Uncharacterized protein, contains Trp-Asp (WD) repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTCTTCCACA ACAAGTGTCG AAACGGGACT AACAAACCCA ACTGTGTGAT TGCTATCTTT
AATAGCCGAT TTCGTCCTTG TAAGCCACTT CTCCAGCTGA TTTCCGTCGA TTATTCACTT
AGTTCGTCTA CTACTGGAGT CCGTAGAAAA TTCACAACCA GATAGGATTC CCGATCACAA
GTAAAAGCAT AAAGCAAACA ATACCATGTC CAAGTCCACC GAGTTCTTCT GTATGTATCT
GACTTTGAAA GAGGGAATGG CAAGAAGCCT GACTAGTGAG AATTAAAGAG AATTGAGATC
AGCGTAGTAC GGCTGATTTG GTTGATTTGA TTCTGAAATT TCTGGAAATT CTGGAGAAGA
GAATTTTTGT CATGAAACTA TTCCAGATCT CTACCCGGAG ACAGACATTG TTAAGATTGA
GGGTATATGA CTACGAGTAT AGAGGATAAT ACCGATAATG CTGATATCCA GATAATGGCA
TTGCCACTGT TAGTGAATCT CATCTCTCAT CTGAAATCTG TAAATGCATC TGAAAATCAT
TTGAGTATTC GCGTACAAGA ATTATGAACT TTTGAATTTC AATAAATTCA TTCTACAAAC
ATCTACAAAA TCCTCAGAAT GTACAGAATC CACAGAATAT GCCAAATCTA CAGATCTACG
AAATCAACAA TTTCATCAAT ATTACGAAAT TTTTGAAAAT AATTCTCATT TTCTCTCATT
CTCATACTCT TCATACTTAA CATCTTATAC TAACCTGCCA GGTCGTCTAC CACGGTCGAT
AGAATTGACA CATGACTACG AGGAAATCAC GCCGTCTCCC AAAGCGGCGG AAGAATGCCG
TTCGGCCTTG TACTCGCCCA ATGGAGCATT CTTTGCTTAC ACCCAGCCCA ACGAGGTGAT
AGTATTGAAT ACTAAGAGTA AGGCTGAGTT GTACCACAAG ATCGAGTTGC CCGAGGTGTT
TGATATATAT TTTTCACCAC AAGGAACGTT CTTATGTTTA TGGTGCAAAC CCATTCAAAT
CAACCGTGAA AACGGAACCT GGAATAACAA CTTGAAGATT TTCAACTTGA AGACCAAGTC
CTTGATAGTG GAATGGCTGC AGAAACACCA GAGCGGATGG AAGCCCCAGT TTACCCAGGA
CGAGAAACTC GTAGCCAAAA ACTTCAACAA CAAGGAAATC CATTTCTTTG ACATCAGCAC
GTCTCTGCAG GAAACCATAA ATATAAACCA GCCTACCCAC AAGTACAAAG TGGCTGATGC
CAAACAGCCG TTCCAGAACT TCCAGATTTC ACCAGGTTTA AACCCCTCTG TTGCTATCTT
CATACCAGAA GCTAGTGGCA AACCAGCCTC GGTGTTGATC TATAACGTTC CAAACTTCAA
CCAACCCACC TGTAGCAAGA ACTTCTTCAA GGCTGAACGG TGTCAATTGA AGTGGAACTC
GTTGGGTACA GCATTGTTAG CATTGGCCTC TACCGACCAC GATACCAGTA ACAAGTCGTA
CTACGGCGAA ACCAACTTGT ACCTCTTGGG AATTGCCGGT TCATATGATT CCAGAATCGA
CTTGAAGAGA GAAGGACCCA TTCACGACAT CACCTGGTCT CCTTCTGCCA GAGAGTTTGC
TGTTATCTAC GGTTACATGC CATCAGAAAC GACTTTCTTT GATGCTCGTG GTAACGCTAT
CCACTCGTTA CCTACAGCTC CACGTAACAC CATCTTGTAT TCTCCTCACG CTCGTTACGT
GTTGGTTGCC GGTTTCGGCA ATTTGCAGGG AACTGTAGAT GTATACGATC GTCAGAACAA
GTTCAGTAAA GTCGTAACCT TTGAAGCTGC CAACACTTCT GTGTGCGAAT GGTCACCTTG
TGGACGTTAC ATCTTGACTG CAACGACTTC TCCTCGTTTA CGTGTGGATA ACGGCTTGAA
GGTGTGGCAT GCATCTGGTC AATTGGTTTA CTTGAAAGAG TACCAAGAGT TGTATGCAAT
TGGATGGAAG CCTCAGACTA TCGCTGAGTT TCCTCCTTTG AAGCAATTGG AGCCTGCTCC
ACCAGCCCAT GACTCGGCAC GTGAATACAT CGCCAAGAAA GCTGCTGCTT CAGCTACTGC
TGCTTCCAAG CCTGCTGGTG CATACCGTCC TCCTCATGCC AGGGGCAGTT CTGCTCCAAG
CACAGCTACT TCCTTGTACC AGAAGGAGCT TCAAAACAAC TTGAAGTTAC AACAACAGCA
GCGTAATGGA ATCAACCCTA GTAGTGGCAG AGCCCGTGTT GTTCCAGGAG CCAACCCTGT
AGAGATCAAG GAATCCAAGA CAGCTCAAAA AAACAGAAAG AAGAGAGAAG CTAAGAAGAA
CCTGAAGGAA GACTCTCCCT CTATAGAAGG CTCTCCTGCA CCATCTGCTG CTCCTTTGGG
TCCACCACCA GGACTTGGCC AATTATCGTC TGCCCCAGCT TCTGCCCCAG CTTCTACTCC
AGCTGCTCCA GCTACTCCCT CACCAGTGGC TCCGGCTGTT GCAGCTACTT CCTCTCAGGG
AGGTGTTGTT GTTGGCGGAG TTGCGCTGTT GGAAGAGAAG AAAATCAGAT CGTTGTTGAA
GAAGTTGAGA GCCATCGAGA CCTTGAAGAT GAAGCAGGCC AGCGGCGAAC CTTTGGAAGA
CACCCAGGTC AGCAAAATCA ACAAGGAGGA CGACATCAGA AAGGAGTTGA GTGCATTGGG
CTGGAACGAT TAGGCGACCT CAGTCTACTA CACTCTACCA TCTATATAAA TAATGTAGCA
TTGCAGGTGT CCAGACCACA ATTCAAAATA TAACAGAGTA GAAATGTCTC CTGTAAAATG
GGACTAGAAC TATAGAGATG TACCACTACG GCGCATTGTA AAATCTTGAG TATTGCCACT
CCACAATATA TGATAAAAGT C
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| Protein sequence | MSKSTEFFCR LPRSIELTHD YEEITPSPKA AEECRSALYS PNGAFFAYTQ PNEVIVLNTK
SKAELYHKIE LPEVFDIYFS PQGTFLCLWC KPIQINRENG TWNNNLKIFN LKTKSLIVEW
SQKHQSGWKP QFTQDEKLVA KNFNNKEIHF FDISTSSQET ININQPTHKY KVADAKQPFQ
NFQISPGLNP SVAIFIPEAS GKPASVLIYN VPNFNQPTCS KNFFKAERCQ LKWNSLGTAL
LALASTDHDT SNKSYYGETN LYLLGIAGSY DSRIDLKREG PIHDITWSPS AREFAVIYGY
MPSETTFFDA RGNAIHSLPT APRNTILYSP HARYVLVAGF GNLQGTVDVY DRQNKFSKVV
TFEAANTSVC EWSPCGRYIL TATTSPRLRV DNGLKVWHAS GQLVYLKEYQ ELYAIGWKPQ
TIAEFPPLKQ LEPAPPAHDS AREYIAKKAA ASATAASKPA GAYRPPHARG SSAPSTATSL
YQKELQNNLK LQQQQRNGIN PSSGRARVVP GANPVEIKES KTAQKNRKKR EAKKNSKEDS
PSIEGSPAPS AAPLVAPAVA ATSSQGGVVV GGVASLEEKK IRSLLKKLRA IETLKMKQAS
GEPLEDTQVS KINKEDDIRK ELSALGWND
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