| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88664 |
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| Symbol | |
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| ID | 4838363 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 763322 |
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| End bp | 764922 |
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| Gene Length | 1601 bp |
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| Protein Length | 468 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389678 |
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| Product | predicted protein |
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| Protein accession | XP_001383778 |
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| Protein GI | 150864802 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG5228] mRNA deadenylase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.64572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.542479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTA ATCCACATCT CCAGTATCTC CAGCTGCACC AACTCCAGCA GCAGCAACAG
CCCATGAATG CTACCGGCCA GTCCCCGCAG ATTTCACAGC TCCAGTTGCA ACAGCACCAG
TTACAGAGAC AACAGCTTTT GAACCATCAT CTCCAGCAAC AACACCAGCA CCAGCCCATA
GGAACACCCA CAGCTCAGAA CGTCAGTACT AATCCTTTGT TAGCTGCAAT TAATGGAACT
TCTAACGGAA ACGTCGTTCC AGGGAATGTA AATGGTCCAG GCTCAGGCTT GAACTCTGGT
TTGAACTCTG GTTTGACCAC TGGAGCTCTG GTAAATCCTG TCTTACAATT ACAATTACAA
CAGCAGAAAC AGCAACAGCA GCATCAGTTC CAGCAGTTAC AGGCAGCCCA TCAGGCAGCC
CACCAAGTCC AACAGCAGAT TCCTTCTCAT CAGTTACATA ATCAGGCTCC TCTCATCAAA
GAGGTCTGGG TGCAAAACTT GGAAAATGAG TTTCACACCT TACGAACCTT CATCAACGAC
AAGACATCCA AGATCTTCAT CGCCATACAC GAGGAAATCC CGGGCATCGT AGCAAGACCA
GTAGGCACGT TCAAGTCATC GTCTGACTAT CATTTCCAGA CGTTGCGTTC CAACCTGGAC
TTGTTGAACT TGATCCAGTT GTCATTCTGT GTCACCAAGA TCAAAAACAA CGAGATCAGT
TCCAGCATCA TCTGGCAGTT CAACTTCTTG TATGACTTGA CTAAGGAGAT GTTCAACGAA
GAACATTTGA CCATGTTGTC GCAGTCGTCG CAGATAAACT TCCAGATGCA CATGACTCAG
GGTATTCCTC ATTTTTCATT TGCTGAACTC TTGATTGAAA GTGGTTTGCT TTTGGACCTG
TCCATCAATT GGATCAGTTA TCATGCTGGG TATGACTTGG GCTTCTTTGT TAGCTTGCTC
ATCAACGATA ATCTTCCTGT CGATGAAAAA GACTTCTACT CCTGGTGCTC CAAGTACTTC
CCCAACTTCT ACGACTTGAA GTATATCGGT AGCCAGTTGT TGAACACACC CAATGGCGAA
GATACAGCTA AGGCTTCCAA TAATAAACCA TCCATAGAAT ATTTGGCTGA AGAATTGCAC
TTATTGCCTA TCTCTCCTGC TATCCGTCAA CACTTTGCTG CGTCTATGTC ATCTCACTTT
CCGGGCCATC AACAGCAAAT GACCTCTACT TTACATGCCT ACTTGTCAAT GGAGTGTTTC
AAGGAGCTTT TGAGACAGTC GTCTTTTGAT CTTGCTTCGT TTTCACGCTT CAAGGGCTAC
ATCTGGGGCT TGGGCAATTT GTATGGTAAC GGATCTGTAG ACGAGCAATT TCAGATCAAC
GGGGCCATTC CTCAGCCCTC AACACCCTCG GGAGGCAACT CAAAAAGCGG TGTCGTTCAC
TATGGAAGAC CCCTTTGACT TTTGTTGGTT GCTATGCCGC TTTTAGAACA AACTTGTACT
TGTATGTTTT CCTTCTATAA TATTCTTCAT TTCCATGTAA ATTAGATATT GATTCTTGCA
ATTAATATAT ACTATATACT ACACTATCCA AGCTCTATGA T
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| Protein sequence | MNVNPHLQYL QSHQLQQQQQ PMNATGQSPQ ISQLQLQQHQ LQRQQLLNHH LQQQHQHQPI
GTPTAQNVST NPLLAAINGT SNGNVVPGNV NASVNPVLQL QLQQQKQQQQ HQFQQLQAAH
QAAHQVQQQI PSHQLHNQAP LIKEVWVQNL ENEFHTLRTF INDKTSKIFI AIHEEIPGIV
ARPVGTFKSS SDYHFQTLRS NSDLLNLIQL SFCVTKIKNN EISSSIIWQF NFLYDLTKEM
FNEEHLTMLS QSSQINFQMH MTQGIPHFSF AELLIESGLL LDSSINWISY HAGYDLGFFV
SLLINDNLPV DEKDFYSWCS KYFPNFYDLK YIGSQLLNTP NGEDTAKASN NKPSIEYLAE
ELHLLPISPA IRQHFAASMS SHFPGHQQQM TSTLHAYLSM ECFKELLRQS SFDLASFSRF
KGYIWGLGNL YGNGSVDEQF QINGAIPQPS TPSGGNSKSG VVHYGRPL
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