Gene PICST_88630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_88630 
SymbolNUO1 
ID4838080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1079368 
End bp1080329 
Gene Length962 bp 
Protein Length226 aa 
Translation table12 
GC content42% 
IMG OID640389395 
Productmitochondrial complex I NUIM TYKY subunit (proton translocation) 
Protein accessionXP_001383493 
Protein GI126133937 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.970128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CACCCACAGA GGTCCCACAG TCTACCTATA GAACCGACGA AATATACTCG TGACTTAGAC 
GAAGTCATCC TAGCCGTTTC GTGTTTATCT GAATTCTGTA GAAATTCGAA ATTGTAAATT
TTTCTCATCA CATATTTCAC ATACAATGTT CAAGCAATTG ATAACAGCAG TGCCTAGACA
GCCAATTGTT GGCCAACGTT TCATTTCCAA CGCTTCCAGG CTCTACAAGC CAGCAGCTGC
CACTGCAGCT GAATACTTGA CTACTGGTGG TTCTACCCAG TCTGTCTGGC CCAAGGGTTT
CAGAGCTCCC AAGCCTAAGA CTTGGGAAGA AAGTAGCGAA AGTGCCTTGA GCAAGGCTAC
CAAGTTCTTC TTCTTGTCGG AAATTGCAAG AGGTATGTAC ATCTGTATGG AAATGTACTT
CAGATCACCA TACACCATCT ACTATCCTTT CGAAAAGGGT CCTATCTCGC CCAGATTTAG
AGGTGAACAT GCATTAAGAA GATACCCAAG TGGTGAAGAA AGATGTATTG CTTGTAAGTT
GTGTGAAGCC ATCTGTCCTG CCCAGGCGAT CACCATCGAA GCCGAAGAGA GAATTGACGG
CTCCAGAAGA ACCTACAAGT ACGATATCGA CATGACCAAA TGTATCTACT GTGGTTACTG
TCAAGAGTCT TGTCCTGTCG ATGCCATTGT CGAAAGTCCT AATGTTGAAT ACTCTACAGC
TACCAGGGAA GAATTGTTGT ACAACAAGGA AAAGTTGTTG GAAAACGGGG ACAAGTGGGA
ACAAGAATTG CAATACTGTA TTGATGCTGA TGCTCCATAC CGTTAAGTCG AATAATACAG
ACTTTCACCA TCCCACATTA ACATAGCATT TAGTTCCTCA ACTACAAAAT TCATATATCG
TCTTGTTGAA GTCGATAGAT ACACTGTATC GTTTATGTAT TCTTTTTATA ATGCATTTTA
TT
 
Protein sequence
MFKQLITAVP RQPIVGQRFI SNASRLYKPA AATAAEYLTT GGSTQSVWPK GFRAPKPKTW 
EESSESALSK ATKFFFLSEI ARGMYICMEM YFRSPYTIYY PFEKGPISPR FRGEHALRRY
PSGEERCIAC KLCEAICPAQ AITIEAEERI DGSRRTYKYD IDMTKCIYCG YCQESCPVDA
IVESPNVEYS TATREELLYN KEKLLENGDK WEQELQYCID ADAPYR