| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88206 |
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| Symbol | ALA1 |
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| ID | 4837683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 711471 |
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| End bp | 714506 |
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| Gene Length | 3036 bp |
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| Protein Length | 954 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640388998 |
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| Product | Alanyl-tRNA synthetase, cytoplasmic (Alanine--tRNA ligase) (AlaRS) |
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| Protein accession | XP_001383420 |
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| Protein GI | 150864558 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.898121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGAGAACCAT GTCCACCACT ACCACGTCCG AGTGGACGGC TTCCAAAGTC AGATCCACCT
TCTTGGACTA CTTCACCAAT AAAAGAGACC ACAAGTTTGT TCCTTCTTCC TCGGTTGTTC
CACACAATGA TCCAACTCTC TTATTCGCCA ATGCTGGGAT GAACCAGTAC AAGCCTATCT
TCCTAGGCAC TGCAGACCCA GCCTCGGATC TCGCTTCATT GAAGAGAGCT GCCAACTCTC
AGAAGTGTAT CAGAGCTGGT GGTAAACACA ACGATTTGGA AGACGTCGGC CGTGACTCGT
ATCACCACAC ATTCTTTGAG ATGTTGGGTA ACTGGTCCTT TGGCGACTAC TTCAAGCCAG
AAGCCATTAC TTGGGCCTGG GAGCTTTTGA CTGAGGTCTA CGGCTTGGAT AAAGACAGAT
TGTATGTGAC GTATTTCGAA GGTGACGCCA AGCAGGGTTT GGAACCAGAT TTGGAGGCCA
AGTCTTTCTG GCTTAAGGTT GGTGTCGCTG AAGACCACAT TTTGCCAGGA AACGCTAAGG
ACAACTTTTG GGAAATGGGC GACCAGGGTC CTTGTGGTCC TTGTTCTGAG ATCCACTACG
ACCGTATTGG AGGTAGAAAC GCTGCTTCTC TCGTCAACCA GGACGACCCC AACGTCTTGG
AAGTTTGGAA CATCGTCTTC ATCCAGTACA ACAGAGAGGC CGACAGCTCG TTAAAGACAT
TGCCAGCCAA GCACATCGAT ACCGGTATGG GGTTTGAGCG TTTGGTGTCT GTTTTGCAGG
ACAAATCTTC CAACTACGAT ACCGACGTGT TTCTTCCCAT CTTTGACAAG ATCAGAGACA
TCACGGGTAT CAGACCCTAC GGTGGTAAAT TCGGCGCTGA AGACACCGAC GGTATTGATA
CGGCCTACCG TGTCATTGCT GATCATGTGA GAACATTGAC GTTTGCCATT TGCGACGGTG
GTGTTCCTAA CAACGACGGT GCTGGATATG TTTTGAGACG TATCTTAAGA AGAGGCTCTC
GTTATGTGCG CAAATACATG AACTACCCCA TTGGTTCCTT CTTCCAACAA TTGGTTGATG
TTGTCATCGA GCAGAACAAA GAGATTTTCC CTGAAATCGT CCATGGTGCC CAAGACTTGA
AGGAAATCTT GAACGAAGAA GAGTTGTCGT TTGCTAAGAC TTTGGATAGA GGTGAAAAGT
TGTTTGAACA GTACGCCATC ATCGCGTCAA AGACTCCAGA ACAGACTTTG TCTGGAAAAG
ATGTGTGGAG ATTGTACGAC ACATACGGTT TCCCATCGGA CTTGACTCGT TTGATGGCCG
AAGAAGCCGG CTTAAAGATC GACGAGCCTG CTTTTGAAAA GGCCCGTCTT GAATCCAAAG
AAGCTTCTAA GGCTATAGGC AACAAAGACG GTGTGGAATT GGTCAAGTTG GATGTTCATT
CCTTGTCGGA ATTAGACTCC AATGCTAACG TCAGCAAGAC TGACGACTCT GCCAAGTATG
GCAGAGAAAA CATCAAGGCT ACTATCCAGG CCATCTATTC TAGCTCTGGA TTCGTTGATT
CTATTGATGA CTCGTCTGTA CAGTACGGAG TCTTATTGGA CAAAACTCCA TTCTACGCTG
AACAGGGTGG ACAGATCTAC GACACTGGTA AGTTGGTAAT CGACGGTAAA GCTGAATTTA
ACGTCACCAA TGTTCAAGTC TATGGTGGTT ATGTTCTTCA CACTGGTAAC ATTGTGGAAG
GCTCGTTGAA TGTCAAGGAT GACGTCATTG CAACCTATGA TGAGTTGAGA AGATGGCCCA
TCAGAAATAA CCATACTGGT ACTCACGTGT TGAACTATGC CTTAAGAGAA GTGTTGGGCG
ACTCTGTTGA TCAAAGAGGT TCCTTGGTTG CTCCAGAAAA GTTGAGATTC GACTTTTCTC
ATAAACAAGC ATTAACTCCT AAGGAGTTGG CTGCCGTTGA ATCTATTTCC AACGAGTACA
TCAAGTCGAA CAAAGAGGTT TTCTACAAGG ATGTTTCGTT GAACGAAGCA AGGGAAATCA
ACGGCTTGAG AGCTGTCTTT GGAGAAACGT ATCCAGATCC AGTCAGAGTT GTTTCCATCG
GTGTTCCTGT AGAAGACTTG CTTGCTGAGC CTAAGAAGGC TGACTGGCAC AAAGTTTCGA
TTGAGTTCTG TGGTGGTACC CACGTAGCCA AAACGGGAGA CATCAAGGAC TTGGTCGTGA
TTGAAGAATC CGGTATCGCC AAGGGTATCA GAAGAATTGT GGCTGTCACA GGTCATGATG
CTCATGCTGT TCAGAAGATC GCCCTGGAGT TCGAAGCTGA ATTGGACCAC GCTGCTGGCT
TACCATTTGG TTCTGTCAAG GAAACCAAGG CCAAGGAGTT GGGTGTAGCC TTGAAGAAGT
TGTCGATCTC CGTTTTGGAC AAGCAGAAGT TAACTGAAAA GTTCAACAAG ATCGACAAGT
CCATCAAGGA CGATTTGAAG ACGAAACAGA AGGCTGAAAC CAAACAGACT TTGGATGTAG
TCAATGAATG GTTGGAAAAG AAAGATGCTG GGGACTACTT GGTTGCTCAT GTTCCAATCA
ACGCTAACGC CAAAGCCATC ACTGAAGCCT TTAACTTGCT CAAGAAGCTG CACAAGGACA
AATCATTGTA CTTGATCACT GGTTTAACTG ACAAGGTTGC TCATGGTTGT TACATTGCTG
ACGAAGCTAT TGCCAAAGGT GTCAATGCCA GCGACTTGGC TCAAGCTGTA TCTGCCAAGA
TTGGTGGTAA GGCTGGTGGT AAAGGCAACA TCGTCCAAGG TATGGGTGAC AAACCTGAAG
GCATTAAGGA GGCTGTTAAC GAAGTGACCC AATTGTTGGC TGAGAAGTTG TAATTGATTG
TTGTAGACTA GTAGTAGAGT TAGAGTAAAC TATTCAAGCA AGAGTAGAAC TCTTCAGACA
GTAGAACAAT TTAGACAATA GTGGAACAAC GTTATAGCAA TAGCTATATG CTTTGATATA
GTATCTGTTA ATAGTATAAT AAATAATGTA AATGTA
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| Protein sequence | MSTTTTSEWT ASKVRSTFLD YFTNKRDHKF VPSSSVVPHN DPTLLFANAG MNQYKPIFLG
TADPASDLAS LKRAANSQKC IRAGGKHNDL EDVGRDSYHH TFFEMLGNWS FGDYFKPEAI
TWAWELLTEV YGLDKDRLYV TYFEGDAKQG LEPDLEAKSF WLKVGVAEDH ILPGNAKDNF
WEMGDQGPCG PCSEIHYDRI GGRNAASLVN QDDPNVLEVW NIVFIQYNRE ADSSLKTLPA
KHIDTGMGFE RLVSVLQDKS SNYDTDVFLP IFDKIRDITG IRPYGGKFGA EDTDGIDTAY
RVIADHVRTL TFAICDGGVP NNDGAGYVLR RILRRGSRYV RKYMNYPIGS FFQQLVDVVI
EQNKEIFPEI VHGAQDLKEI LNEEELSFAK TLDRGEKLFE QYAIIASKTP EQTLSGKDVW
RLYDTYGFPS DLTRLMAEEA GLKIDEPAFE KARLESKEAS KAIGNKDGVE LVKLDVHSLS
ELDSNANVSK TDDSAKYGRE NIKATIQAIY SSSGFVDSID DSSVQYGVLL DKTPFYAEQG
GQIYDTGKLV IDGKAEFNVT NVQVYGGYVL HTGNIVEGSL NVKDDVIATY DELRRWPIRN
NHTGTHVLNY ALREVLGDSV DQRGSLVAPE KLRFDFSHKQ ALTPKELAAV ESISNEYIKS
NKEVFYKDVS LNEAREINGL RAVFGETYPD PVRVVSIGVP VEDLLAEPKK ADWHKVSIEF
CGGTHVAKTG DIKDLVVIEE SGIAKGIRRI VAVTGHDAHA VQKIASEFEA ELDHAAGLPF
GSVKETKAKE LGVALKKLSI SVLDKQKLTE KFNKIDKSIK DDLKTKQKAE TKQTLDVVNE
WLEKKDAGDY LVAHVPINAN AKAITEAFNL LKKSHKDKSL YLITGLTDKV AHGCYIADEA
IAKGVNASDL AQAVSAKIGG KAGGKGNIVQ GMGDKPEGIK EAVNEVTQLL AEKL
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