Gene PICST_8645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_8645 
Symbol 
ID4837988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1730170 
End bp1730532 
Gene Length363 bp 
Protein Length121 aa 
Translation table12 
GC content44% 
IMG OID640389303 
Productpredicted protein 
Protein accessionXP_001383949 
Protein GI126134849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.253296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CCAGTGCAGA TTCCCCCTCC AATCTCACCT AAACAAGACC CTGAGCAAGC GTTGACTCAA 
CAAATCGACT ACTACTTCTC GTTAGAAAAC TTGCTTAGGG ACATCTTCTT AAGAAAGAAT
ATGGACTCCG AAGGATGGAT TGCCTTAGAC TTGATTTTGA ACTTCAAGAG AGTGAAGATC
ATCATCAACG GTATCCAAAA CTCCCTCGAA AACGTCCAGG AGTTCGACGG CAGCATCATT
CTTGAGTCAA TCAAGAAGTG CGAAAATTTG GAGATTCAAT ACATCAACGA CAAGACGGCT
GAAAATGCCG CCATCGACGA TGTCAAGTTG AGAGTCAAGG GTAATTACGA GCAGTGGTTG
TTA
 
Protein sequence
PVQIPPPISP KQDPEQALTQ QIDYYFSLEN LLRDIFLRKN MDSEGWIALD LILNFKRVKI 
IINGIQNSLE NVQEFDGSII LESIKKCENL EIQYINDKTA ENAAIDDVKL RVKGNYEQWL
L