| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82969 |
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| Symbol | GDH3 |
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| ID | 4837765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 1396515 |
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| End bp | 1398014 |
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| Gene Length | 1500 bp |
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| Protein Length | 455 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640389080 |
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| Product | NADP-glutamate dehydrogenase |
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| Protein accession | XP_001383892 |
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| Protein GI | 126134735 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.216433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTTGC CACACGAACC TGAATTCCAA CAAGCTTACA ACGAATTAGT CCACGCTCTT
GAAGACTCTA CCTTGTTCAC CGAACAACCA AAGTACAAGA AGGTTATCCC TGTTGTCTCT
GTCCCAGAAA GACTCATCCA ATTCAGAGTC TCTTGGGAAA ACGACAAGGG TGAGATCGAA
GTCAACAATG GTTTTAGAGT TCAATTCAAC TCCGCCTTGG GTCCATACAA AGGTGGATTG
AGATTCCATC CATCCGTCAA TTTGTCGATC TTGAAGTTCT TGGGTTTCGA ACAAATTTTC
AAAAATGCTT TGACCGGCTT GTCCATGGGT GGTGGTAAAG GTGGTTGTGA CTTCAACCCT
AAGGGTAGGT CCGATGCTGA AATCAGAAGA TTCTGTGTAG CCTTCATGAG ACAATTGGCC
AGATACATCG GTTCTGATAC TGATGTTCCA GCTGGTGACA TTGGTGTTGG TGGCCGTGAA
ATTGGTTTCC TCTTTGGTGC CTACAAACAA ATGCAAAACA ACTGGACTGG TATCTTGACC
GGTAAGGGTT TGACCTGGGG TGGTTCCTTG ATTCGTCCAG AAGCCACGGG TTATGGTGTT
GTCTACTACG TCGAAAAGAT GATCGAAAAG GCCACTCAAG GTAAAGAATC CTTCAAGGGT
AAGAGAGTTG CTATTTCTGG TTCTGGTAAT GTCGCACAAT ACGCTGCTCT CAAGGTCATT
GAATTGGGTG GTACAGTTGT TTCCTTATCT GATTCTAAGG GCTCCATCAT TTCCCAAACC
GGTATCACGC AAGAACAAAT CGCTGCCATT GGTGCCGCCA AGTTGAAGTT CAAGTCTTTA
GAAGAAATCA TCGTGGACTC TGCTTCTGCT TTCTCCGGCT CCAACTCCGT TGAGTACTTG
GCTGGTGTGA GACCATGGGC CAAGGTTGGC CAGGTCGACA TTGCTTTGCC CTCTGCCACT
CAGAATGAAG TCTCTGGTGA AGAAGCTCAA GCTTTGATCG AGGCTGGTGT CAAATATGTC
GCTGAAGGTT CAAACATGGG TTCCACCAAG GAAGCCATTG ACATCTTCGA AGCCAACAGA
AACAACAACG TCTGGTACGC TCCAGGTAAG GCTGCTAACT GTGGTGGTGT TGCCGTCTCT
GGTTTGGAAA TGGCCCAAAA CTCACAAAGA GTCCAATGGA CTGCTGAAGA AGTTGACGCA
AAGTTGAAGA ACATCATGTA CACTTGTTTC GAAAACTGTT ATGAAACTGC TGTTAAGTAC
TCTGCTGAAA AGAACGCTGC TGGCTTGCCA TCCTTATTGA AGGGTGCCAA CATTGCTGGT
TTCATCAAGG TTGCCGACGC CATGTTCGAC CAAGGTGACG TTTTCTAAAT GTCCCCTAGT
GACAATAGAG ATAAGTATAG TTCCAAAAGA CTCGCATTAT TGTTTTCAAT TCTCTAGATT
ATGTTAAAGT ATTAAGTTTA AAGGTTAGGT ATATACAAGT TGATATACAG TTGTAATAAG
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| Protein sequence | MVLPHEPEFQ QAYNELVHAL EDSTLFTEQP KYKKVIPVVS VPERLIQFRV SWENDKGEIE
VNNGFRVQFN SALGPYKGGL RFHPSVNLSI LKFLGFEQIF KNALTGLSMG GGKGGCDFNP
KGRSDAEIRR FCVAFMRQLA RYIGSDTDVP AGDIGVGGRE IGFLFGAYKQ MQNNWTGILT
GKGLTWGGSL IRPEATGYGV VYYVEKMIEK ATQGKESFKG KRVAISGSGN VAQYAALKVI
ELGGTVVSLS DSKGSIISQT GITQEQIAAI GAAKLKFKSL EEIIVDSASA FSGSNSVEYL
AGVRPWAKVG QVDIALPSAT QNEVSGEEAQ ALIEAGVKYV AEGSNMGSTK EAIDIFEANR
NNNVWYAPGK AANCGGVAVS GLEMAQNSQR VQWTAEEVDA KLKNIMYTCF ENCYETAVKY
SAEKNAAGLP SLLKGANIAG FIKVADAMFD QGDVF
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