Gene PICST_82900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_82900 
Symbol 
ID4837747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp44576 
End bp45386 
Gene Length811 bp 
Protein Length248 aa 
Translation table12 
GC content39% 
IMG OID640389062 
Productpredicted protein 
Protein accessionXP_001383649 
Protein GI150864709 
COG category[S] Function unknown 
COG ID[COG5223] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.660884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AAAAAATAGA ATAACGTCTA CTTCACAGAA TGGCGAAGTT GGTTCACAAT GTGCAGAAAA 
AGCAGCACAA GGAGAGATCC CAGACGCTGG ATAGAGCCAG ATTTGGTCTA TTGGAAAAGA
AGAAAGATTA TCGATTAAGA GCTGCTGATT ATCACAAAAA ACAGGCTGCT TTGAAGGCAT
TGAAGAAGAA GGCTGCGGTA TACAATCCAG ACGAATACTA CCATGCTATG ACAAGAAGAA
AAGTCGATGA CAGAGGAATT TTAATAACAG ACAGAGATAG TGAAGTGTTG AGTGTAGATC
AAGTTAAATT GCTCAAGACG CAAGACGTGA ACTATGTGAG GACTGCCAGA CTTTCTGAGG
TTCAAAAAAT AGAGCGAGAG AAGGAAGAGC TCGGTTTCAG TGCCAGTGGT AAACATACAG
TGTTTGTAGA TTCTCTCGAA AGCCAGCAAT CATTCAATGC CGCAGATTTT TTTGATACAG
ATGCCAGTCT TTTAGAGAAG AGAGAAAACA GGCTAAGAAT AGGCCAACTC CAGAGTGACA
AACGGCTTGT TAGTGAAGAT TCCATACTAG AACAGAGATT AAAGGACAGG CAGGATTTGA
AGAAGTTGAA GCAATTTAAG GCATTAGAGA GAAGATTAGA GAAGGAAAAG CAGTTGAAAG
AAGTTGAAGC CAGAATGGAA ACTACAAGAG AATTGATGAA GAAAGGTAGT AAGAAGAAAA
TGGTGGATGC AGCAGGAAAG GTTTCATTTA AGTGGAAAAA CCAGAGAAAA CGTTAGCATC
ATTTATAGCA TAATACACAA TAGAGCATTT G
 
Protein sequence
MAKLVHNVQK KQHKERSQTS DRARFGLLEK KKDYRLRAAD YHKKQAALKA LKKKAAVYNP 
DEYYHAMTRR KVDDRGILIT DRDSEVLSVD QVKLLKTQDV NYVRTARLSE VQKIEREKEE
LGFSASGKHT VFVDSLESQQ SFNAADFFDT DASLLEKREN RLRIGQLQSD KRLVSEDSIL
EQRLKDRQDL KKLKQFKALE RRLEKEKQLK EVEARMETTR ELMKKGSKKK MVDAAGKVSF
KWKNQRKR