| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82880 |
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| Symbol | |
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| ID | 4838072 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 177773 |
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| End bp | 180240 |
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| Gene Length | 2468 bp |
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| Protein Length | 812 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389387 |
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| Product | predicted protein |
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| Protein accession | XP_001383321 |
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| Protein GI | 150864485 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5096] Vesicle coat complex, various subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAAAAACCAT ACCAATGGCA TCGTTGAAGT CGTTCATCAA GGCTGTCCGG AAAGCTAAGA
CCATTGCCGA CGAACGGGCC GTAGTCCGGA AAGAATCGGC TGCAATCCGG ACCTCGTTTA
GAGACGTCAC ATTGGATCAG ACCACAAGAC GTATCAACAT CTCCAAGTTG CTCTATCTCT
ATATCATGGG CGAAAAGACC CATTTTGGAC AAGTGGAATG CTTGAAGTTG CTAGCTTCGC
CACGTTTTGT AGACAAACGG TTGGGCTATT TGGCTGCGCT GCTTCTTTTA GATGAAAACC
AAGAGGTACT CACTCTTCTC ACCAACTCTT TGGACAATGA CATGCAACAC CCCAACGCCT
ATATCGTAGG ATTGGCCTTG TGCTGTTTGG GCAACATTGC GCTGCCGGAA TTGGCTCGTG
ATTTGTACCA AAATGTCGAG AAAATCATCG CCTCTAATAA CGTCTACTTG AAGAAGAAAG
CATGCATTGT TGCTGCCAAA CTTGTTGAGA AGGAACCGGA CTTGTTTGAG TTCTTTTTGC
CCAAAATAGG TCAATTACTT TCAGACAAAC TGCCAGCCGT CTTATTGGGC GCTCTTCGCT
TGACCAACTC GTTGTATTTG GCTAGCGAAG ATACTCATCC TGTTTTGGTG AAGAATATTC
CCAAGATCAT ATCCCATTTG AAACGTGTAA ACACCAGCGG ATACCAGCCA GATTACGATG
TCATGGGAAC AGCGGATCCA TTCTTGCAAG TAGCCTTGTT GTCAACGTTG AGAACGTTGG
CTACAGACGA ATATTGCCCC GATCAGCATC TTGAAGAAAT CAACGATATT TTGACCCAGG
TCGCTTCTAA CTTGGACAGT GGTAAAAACG CAGCTCATGC TATTTTGTAC GAGTGTGTGA
GGACGATTTT CGCCATCCAA TCGGACCAGT CGTTGAAGAT CTTGGGTGTA AACTTGTTGG
GAAAATTCTT ATCCACCAAA GAAAACAACA CCAGATACGT AGCACTTGAT TCCTTGTTAT
CAGTGATAAG CATCGAACCA TTGGCAGTGC AAAGACACAG ATCCACAATT GTGAACTGTT
TATCCGATGG AGATATCTCC ATCAGAAGAA GAGCGTTGGA GTTGTCGTTT GCAATTTTGA
ACGAGCAGAA TATCAGAGTA CTAGTTCGTG AAATCTTGAC ATTCTTGGAA AACTGCAACG
ACAACGAGTT GAAGCCCTAC GTCACATCGC AGTTGACGAT TGCTGCTAAC AAATACTCGC
CCAATGAAAA GTGGCATTTC GACACTTTGA TCAGAATGTT GAAACTCTCA GGTGATTATG
TCACTTCTGA CAACATCTCC AGCATCTTGG CTCTCATTTT ACAATGTAAC GATAACGAGT
TGAAAAAGCA CATTGTACAG AAACTACTTA CTTCGTGTTT GGAAGACTCT ACACAATTTG
GCTTATCTTT GATTACAGTG TGGTCTCTTG GAGAATATGC CGATTTGGTA TTGGGAACCA
ATGTCGAAGT CCATTCGAAG GAAATTCTTG TTACCGACAA GGTTGTGCTA GACTTAATCG
ACAACTTGAT CAACAACTCT ACTTATTCTG AACTGGAAAC AGTTCAATTG ATTACATACA
TATTGACAGC TGTGATCAAG TTGTCGGTGA AGTTCAGCGA TGGGGCATCT CTTGAGCATT
TAAGACAGAT CTTGAATGCC AGGACTTACG ATAACAACTT GGAAATTCAA GTAAGAGCAG
TCGAGTATCA GGAAATATTC GCACAAGATG TAAGTCTCAA GAGAGGTTTA TTGGCCAGAA
TGCCTGCTCC TCCAGTCAAA GAAAGAGAAT CCTTGACATT ACAGAAAGCA AACAACAAGG
CTAAAAGAGT AGGATCTTCA CCCAACTCTG GTGTTCCTTC CACTACAGAA GATTTGTTAC
TTGATCTCAT GGATGATAAT GGTGATAGCA ATGGTGTAAA TGGAAACAAG GATGCTACTG
CATTGTTGTC AGATATTTTT GGTGGAAGCA ATGGTACTGT AAGTGCTTCT CAAAATAACA
ATGCAGCCAT CTTGGACTTG TTCAATACAT CACCAGCAGC ACCTGCTGCT CCCATAGCAG
TCGCTACTCC TCAGGAAGAA ACAAATTCCA TTCCAGCATT TTCAAACAAC TTCATCAAAG
TTTCTTTTGT GCCCAAGTCC TTCCCATCCA ATGGTGAAGC CATAATAGAA GCACTTGTAG
ATTCGAATTC TGCTAGCACA GTAGAGCAAT TCCAATTCCT AATTGCTGTT CCAAAGACCC
AGAAGTTGAC GATCTCGTCG TCGTCTGAAG GTGACACTTT GGTACCGGGA GGAAGAATCA
AACAGGTATT AAAGTTGGCA GGTAAGCAAG GATCGAAGGT CAAGTTCAGA GTCAAGGCAA
AGTATACTGT AAACGGGAAT GCTATTGAGG AACAATTTGA CTTTGGTGCC TTTAGTCAGA
CTCTTTAG
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| Protein sequence | MASLKSFIKA VRKAKTIADE RAVVRKESAA IRTSFRDVTL DQTTRRINIS KLLYLYIMGE
KTHFGQVECL KLLASPRFVD KRLGYLAASL LLDENQEVLT LLTNSLDNDM QHPNAYIVGL
ALCCLGNIAS PELARDLYQN VEKIIASNNV YLKKKACIVA AKLVEKEPDL FEFFLPKIGQ
LLSDKSPAVL LGALRLTNSL YLASEDTHPV LVKNIPKIIS HLKRVNTSGY QPDYDVMGTA
DPFLQVALLS TLRTLATDEY CPDQHLEEIN DILTQVASNL DSGKNAAHAI LYECVRTIFA
IQSDQSLKIL GVNLLGKFLS TKENNTRYVA LDSLLSVISI EPLAVQRHRS TIVNCLSDGD
ISIRRRALEL SFAILNEQNI RVLVREILTF LENCNDNELK PYVTSQLTIA ANKYSPNEKW
HFDTLIRMLK LSGDYVTSDN ISSILALILQ CNDNELKKHI VQKLLTSCLE DSTQFGLSLI
TVWSLGEYAD LVLGTNVEVH SKEILVTDKV VLDLIDNLIN NSTYSESETV QLITYILTAV
IKLSVKFSDG ASLEHLRQIL NARTYDNNLE IQVRAVEYQE IFAQDVSLKR GLLARMPAPP
VKERESLTLQ KANNKAKRVG SSPNSGVPST TEDLLLDLMD DNGDSNGVNG NKDATALLSD
IFGGSNGTVS ASQNNNAAIL DLFNTSPAAP AAPIAEETNS IPAFSNNFIK VSFVPKSFPS
NGEAIIEALV DSNSASTVEQ FQFLIAVPKT QKLTISSSSE GDTLVPGGRI KQVLKLAGKQ
GSKVKFRVKA KYTVNGNAIE EQFDFGAFSQ TL
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