| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82843 |
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| Symbol | HOL5 |
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| ID | 4837726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 592129 |
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| End bp | 594239 |
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| Gene Length | 2111 bp |
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| Protein Length | 656 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389041 |
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| Product | member of major facilitator superfamily multidrug-resistance protein |
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| Protein accession | XP_001383395 |
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| Protein GI | 126133741 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.451266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.203181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCTATTTGCA TAGCTTTGTC TCTTGCCCTT CAAAATGACT TCCCGTCTAG GCATCCGACA
AGCGCGGGTC GAAGAAGTCA CTGGGACCAT CATAATGATG GATGATCCAG ATGACATGCC
ACTTGATTCT ACTTCGGCTC AAGATGGCTC GCTTCACAGA GAGTCACTTA CCATCAAGAA
AACTGCCACC GGTGTGATTC TCAATCCACA ACCACACGAC TCGCCCAACG ATCCTCTCAA
CTGGTCTGTA TGGAAAAGAG ACTTGTGTCT ATTAATCATT GGATTTCAGT CATTTCTAGG
AGGCGGCCAG TCTCCGTTGC TTGCTGCTGG TATGAGTTCA TTAGCAACTG AGTTTCACAA
ATCTACAGCA ACAGTTGCCT ATCTTGTAGG AGGGTTCATG TTGTCTTTAG GTGTAGGTTC
CGTATTTGCC AGTCCTTCTG CCGTTCTCTT CGGCAAGAGA TTGGTGTATT TGGTTGGGAT
CCTTGTATTT CTTCTCGGCT CTGTCTGGGG AGCCTCGTCT AAATCGTTTG GCAGCTTAAT
GGGTGCCAGA GTGATGACCG GGTTTGGTGC GTCTCCTACC GAATGTTTGC CCAGTTCTAC
TATTGCCGAA ATTTACTTTG CTCATGAAAG AGCCTATAGA GTCGGCATAT ACACCATGTT
GATGTTGGGA GGCAAAAATA TCATTCCTTT GCTTTCGGGT TTGGTGTTCC AGAACCTAGA
CAGACACTGG CTATTCTGGA TCCAAGCAAT GTTTTTGGGT GCAAATCTCA TTCTCACCTT
CTTGTTTGTT CCAGACACTT TCTGGGACAG ATCGCCTACA CCTAATAAGA GATCTCAAGA
GGAAACAGAA GCTGCCATGA AGGTGAAATC GTATCACCCA CCAGAGCAAA GACCAAATGC
ATATGCTTTG CAGCGTCCTT CACAAATGAA TGTGTTGGAT TTGGAAAGCA TTTCATCCAC
AGTAAACCCC ACTAATTCTC AAACAGGACA GCCCATCGGC ATAACCGAAG CCGAGACTAC
TCATTACAAT ATACCCAAAC AAACCTTTCG TCAGGATTTG GCCATTTATT CTGGTAGACA
CACAAAAGAC AGTTGGTGGA TGGTGGCTCT AAGACCCTTC TTCTTGTACA CATATCCCTC
TGTTCTCTTT GGTTCGTTTA TATACTCCTT CGCTGTAGTG TGGTTGATTG TGATTTCTGA
AACTATCTCA GAAATTTTTA GAGGCGAAGG GTATGGATAT TCCCAAGGAA CAGTTGGATT
ATTCTATGTT TCTCCATTTG TTGGAGGTAT CTTAGGCTCA CTCACTGCTG GTTTAGTTAG
TGATAGATTG AGTCGATTCC TAGTGAGCAA GAATAAGGGA GTATATGAAC CTGAGTTCAG
ATTGTTCATG ATCATACCTT CTACATTTTT CATAGCTTTT GGTCTTATGG GATTTGGATG
GTCTGCGCAA GACAAGGATT TGTGGATTGG ACCCGTTATC TTCTTTGGAT GTTTGAGTTT
TGGAAGTTCC ATGGCAAGTA CCACTGCGAT AACATTCACA GTGGATTCTT ATAAGGTTTT
CTCTGCTGAA GCATTAGTAT CCTTCAACTT CTTAAAAAAC TTGATTGGTT TCATATTTTC
GTTGTTCAAT AACAACTTCG CTAATGCCCG TGGAAATCGT ACTGCTTTTG TAACTTATGG
AGCAGTGCAA ATCTTTGTGA GTTTATGGGC AATCCCATTG TACATTTACG GGAAACGTTT
GAGAAGTTGG ACTGATAAGA AGGAATTCTT GAAAAAGTTG TACCATGTTG ATAATATTCC
TAGAAATGTC TACAAGGAAA GCATGGCCAC CAGTGCTGCG AATATCTCCT CGCCCAAGGA
AGCAAGCACT CCATCAGGGC CAATCTCTTC TTCACTCTCT GTTGACGACA ACACGGTTCA
TAATAGTGAG GTGGAAAAAG TCAGTAGCAA TAAGGACGAT AGTGTTACGT CTGAAGATAC
CGCACCACCA CAAAAGAGCA TTTGAATAAC AGTCAAATCA GCCTGGAATC TTACGAAATG
ACGATTGCAT TAATTCTGTA CACTAGTCTA TTAAAATACG CTTTATAGAA AAATAACTAT
ACTTGTTTCA A
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| Protein sequence | MTSRLGIRQA RVEEVTGTII MMDDPDDMPL DSTSAQDGSL HRESLTIKKT ATGVILNPQP
HDSPNDPLNW SVWKRDLCLL IIGFQSFLGG GQSPLLAAGM SSLATEFHKS TATVAYLVGG
FMLSLGVGSV FASPSAVLFG KRLVYLVGIL VFLLGSVWGA SSKSFGSLMG ARVMTGFGAS
PTECLPSSTI AEIYFAHERA YRVGIYTMLM LGGKNIIPLL SGLVFQNLDR HWLFWIQAMF
LGANLILTFL FVPDTFWDRS PTPNKRSQEE TEAAMKVKSY HPPEQRPNAY ALQRPSQMNV
LDLESISSTV NPTNSQTGQP IGITEAETTH YNIPKQTFRQ DLAIYSGRHT KDSWWMVALR
PFFLYTYPSV LFGSFIYSFA VVWLIVISET ISEIFRGEGY GYSQGTVGLF YVSPFVGGIL
GSLTAGLVSD RLSRFLVSKN KGVYEPEFRL FMIIPSTFFI AFGLMGFGWS AQDKDLWIGP
VIFFGCLSFG SSMASTTAIT FTVDSYKVFS AEALVSFNFL KNLIGFIFSL FNNNFANARG
NRTAFVTYGA VQIFVSLWAI PLYIYGKRLR SWTDKKEFLK KLYHVDNIPR NVYKESMATS
AANISSPKEA STPSGPISSS LSVDDNTVHN SEVEKVSSNK DDSVTSEDTA PPQKSI
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