| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82821 |
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| Symbol | DBP2 |
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| ID | 4838019 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 147617 |
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| End bp | 150149 |
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| Gene Length | 2533 bp |
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| Protein Length | 530 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389334 |
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| Product | DEAD box RNA helicase |
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| Protein accession | XP_001383660 |
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| Protein GI | 126134271 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.283146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTTACAACTA TACAAAAGTC TGCAAAAATG AACAACTACA ACAACGGTGA CTACAAAGGT
GGCAGAGAAC AACACTTCGG TGGAAACAAC AACTACAACC GCGGTTATGG TGGACAGCAA
AGAGGTGGTT TCAGAGGTGG AAACGGTGGA TTCGGTGGAA ACCGTTACAA CGAGAGAGTT
GAACTCACCA CCCCAGACTG GGACTTGGAA TCGTTGCCAA AGTTCGAAAA GAACTTCTAC
ACTGAACACC CAGATGTTGC TGCCCGTAGT GACAAAGACA TTGCTGCCTT CAGAAACGAA
CACCAGATGA GCTGTTTGGG CTCAGACATT CCTCATCCCA TCACTACTTT CGATGAGGCT
GGATTCCCAG AATACGTGTT GAACGAAGTC AAGGCACAGG GTTTCCCTTC TCCAACTGCC
ATTCAATGTC AGGGTTGGCC CATGGCTCTT TCTGGTAGAG ACATGGTGGG TATTGCTGCT
ACTGGTTCGG GTAAGACCTT ATCGTACTGT TTGCCTGCTA TTGTCCACAT CAACGCTCAG
CCCTTGTTGA GCCCTGGTGA TGGTCCTGTT GTGTTGGTTT TGGCTCCTAC CAGAGAATTG
GCTGTTCAGA TTCAGCAAGA ATGCTCCAAG TTCGGATCTT CTTCCAGAAT CAGAAACACC
TGTGTCTATG GTGGTGCACC AAAGGGTCAA CAGATCAGAG ACTTGGCCAG AGGTGTTGAA
ATTGTCATTG CCACTCCAGG TAGATTGATC GATATGTTGG AAATGGGTAA GACCAACTTG
AAGAGAGTAA CCTATTTGGT TTTGGATGAA GCCGACAGAA TGTTGGATAT GGGTTTCGAA
CCTCAAATCA GAAAGATTGT CGACCAGATC AGACCAGACC GTCAAACCTT GATGTGGTCC
GCCACTTGGC CAAAGGAAGT TCAAAACTTG GCTAGAGACT ACTTGCAAGA CCCTATCCAA
GTCAGAATTG GTTCCTTAGA ATTGGCTGCC TCTCATACTA TCACCCAAGT TGTTGAAGTT
ATTTCGGAAT ACGAAAAGCG TGACAGATTG GTAAAGCACT TGGAAACCGC TACCACCGAG
AAGGAGTCCA AGGTGTTGAT CTTCGCCTCC ACCAAGAAGA CTTGTGATGA AGTCACTTCG
TACTTGAGAG CTGACGGATG GCCCGCATTG GCTATCCACG GTGACAAGCA ACAGAGTGAA
AGAGACTGGG TCTTGAGAGA ATTCAAGACC GGTAAATCCC CTATCATGGT GGCTACTGAT
GTTGCTGCCA GAGGTATTGG TATGTTTTAA TGATTTTACG ATTACTAACG ACTATTTATT
TAGGTGTTCT TGGAGTTTGG AAAGCAAATT GTCTTTATGA GAGTCGCAGA GACTTAATGA
CTTAGACTTT TTTTCATAAG CAAGGGGCCA CGAAAAGAAA TGAACAATAT GGAGCATATT
GCATACCGTT GAACAAACGA TTTGACGATG AATGCAACAA CAAAAAAACA TAGAGGTGAT
AGGAAAATGC CGGCCATTTT CCATCTTCCT CAAAGAACAA ACGGAAAGAG AGCAGAATTT
ATTTCATATT TGGAAAAGCA TGTTCACATT GATCTATAAT ATTAATCTCG ATAGGCAAAC
GATTTTATTT TCAGAAGAAT TCTTGAAGTA GAGTGATTAT TGGTTTGGAA CATATTTGAG
CCTTTAAGGT TTCAACCAAC ATACGCAAGA AGTAAGGAAT CTTTTGAATG GATAGCCTAG
GAAATTCAGA TGTACTAGTA CCGGAAGACT GCGAAGGCTT CTAGTATTAA TGTTTCTTGA
GACCAATTAA TGTTATATAT AAATGCTTTT CTAGTATGAT TCTAATAGAT GAAATCTCTC
TTGTCAATTT TGTCATTGTA TTTTGCCTTA TTGTATTTTG CCTCGCCGCT AGGGATGTCA
TTTTTGACCC CAATGACCAG CAGCGCTTTG TAGAACTCCC TGAGAATATC TCAAATTAAG
CAGATAGATC GTATTGTAAT TTTGTTCGTG TGAACTCTAT ACTAACAACT CATTTAGATG
TCAAGGGTAT CAATTTCGTT ATCAACTTCG ACATGCCAGG TAACATTGAA GATTACGTCC
ACAGAATCGG TAGAACCGGA AGAGGTGGTG CCACTGGTAC TGCTGTTTCT TTCTTCACCG
ATGGTAACAA CAAGCTTGGT GGTGATTTGT GCAAAATCAT GAGAGAAGCT AAGCAAACCA
TTCCTCCAGA ATTACAGAGA TTCGACAGAA AGAGTTTCGG TGCCCACATT AGATACGGTG
GTGGACGTGG TGGTCGTGGT GGCTACGGCC GTGGACGTGG TGGTTACGGT GGACGTGGTG
GTTATGGTCA AAGAAACTAC CAAACTGGAT CCAACCAGGC TCCTTTGTCC AACCGTCGTT
TTTAAGCAGC TGTCCATATA AGGCAGTCGC TGTTAGGGCT TCATTCGTGT ATCTTAGAAT
TTATAGAGTA TTTTCCTAGC ATTGCTAGAT CCATTGCATT TCTTATCTAG TTTTATTATA
TTTATTTGTT GCA
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| Protein sequence | MNNYNNGDYK GGREQHFGGN NNYNRGYGGN GGFGGNRYNE RVELTTPDWD LESLPKFEKN
FYTEHPDVAA RSDKDIAAFR NEHQMSCLGS DIPHPITTFD EAGFPEYVLN EVKAQGFPSP
TAIQCQGWPM ALSGRDMVGI AATGSGKTLS YCLPAIVHIN AQPLLSPGDG PVVLVLAPTR
ELAVQIQQEC SKFGSSSRIR NTCVYGGAPK GQQIRDLARG VEIVIATPGR LIDMLEMGKT
NLKRVTYLVL DEADRMLDMG FEPQIRKIVD QIRPDRQTLM WSATWPKEVQ NLARDYLQDP
IQVRIGSLEL AASHTITQVV EVISEYEKRD RLVKHLETAT TEKESKVLIF ASTKKTCDEV
TSYLRADGWP ALAIHGDKQQ SERDWVLREF KTGKSPIMVA TDVAARGIDV KGINFVINFD
MPGNIEDYVH RIGRTGRGGA TGTAVSFFTD GNNKLGGDLC KIMREAKQTI PPELQRFDRK
SFGAHIRYGG GRGGRGGYGR GRGGYGGRGG YGQRNYQTGS NQAPLSNRRF
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