| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82790 |
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| Symbol | SSL2 |
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| ID | 4838090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 212741 |
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| End bp | 215330 |
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| Gene Length | 2590 bp |
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| Protein Length | 838 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389405 |
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| Product | DNA helicase |
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| Protein accession | XP_001383669 |
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| Protein GI | 150864721 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | [TIGR00603] DNA repair helicase rad25 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.179856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTACC GTCGTCCTGG AGGAATCAAC TACGCGGAGC TTGATCAGGG AAATTATTCA
GATGATGACT CATTCGAAGA TGAACCCCAG AGCAGAAGTA AAGATGATGA CTATAGCTAT
GGAACCAGAA ATCCCAAGAA GAAGTCATCC AATGCCTCTG CTTCTTCGAA AAAGAGAAAG
GCCGAACAAT CTATAGAGAC AATTCGTGCT GAGGTCAATG ATACTGTTTA TTCTGATGAC
GATTTAGTAG AGTTGACTCC AGATATACCT CTGGACTATG TTCCTGACGC GGTGCTGAAA
GTGTTTGGTA AGCTGGATTA CTCATACTTG AAGTTGAAAC CAGACCATTT CTCACGGCCA
ATATGGATGT CACCAGATGG ACGTATTATT CTAGAACTGT TTTCGCCTTT GGCTGAACAG
GCCCAGGATT TTTTGATCAC AATCGCCGAA CCTATATCAA GACCTTCCCA CATTCATGAA
TACAGACTTA CGCCGTATTC GTTGTATGCT GCTGTTTCAG TGGGATTGGA GACCGACGAT
ATTATTCTGG TTTTGAGTCG GTTATCAAAG GTGCCTGTGG CGGAAAAGGT CGTAGAGTTC
ATCAAGAGTG CTACAATTTC TTACGGTAAG GTCAAGCTCG TCTTGAAACA TAACAGGTAC
TTTGTAGAAA GCACGCAAGC TGATATATTG CAGATGCTAC TTAAGGACGA GGTTATTGGG
CCGTTGAGAA TACAGTCGTC TGAAAACACC GTCACAAGCA ACGGTTTGGT CAAGAGTGCT
GCCCCTACCA AAGGGGACAT GGTTATTCCT GGAACTAAGA AGAATAATGA AAGTGACGAG
AAAAAGAAAG ATACAGAAGA CATATATGCC TCGGTAGTCG GCAGCCGTAA CGACGAGGAT
GACTATGACG TAGATGCCGT TCATTCGTTT GAAATCGCTA ACGAATCCGT GGAGATTGTA
AAGAGAAGAT GTCAGGATAT CGACTATCCT GTTTTGGAAG AGTACGATTT CCGTAACGAT
GCTCGTAATC CAGACTTGGA GATCGACTTA AAGCCTTCGA CTCAGATTCG GCCATATCAA
GAGAAGTCAT TATCGAAGAT GTTTGGAAAT GGTCGTGCCA GATCTGGGAT CATTGTGTTG
CCATGTGGGG CTGGTAAAAC CTTGGTAGGT ATCACTGCTG CGTGCACCAT CAGAAAGTCT
GTCATTGTGT TGTGTACCTC GTCTGTGTCT GTCATGCAGT GGAGGCAGCA GTTCTTGCAA
TGGTGTACGA TCCAGCCAGA AAATGTCGCT GTTTTTACTT CGGAAAACAA GGAAATGTTT
ACCAGTGAAT CAGGTTTGGT CGTTTCCACA TATTCTATGG TAGCTAACAC TCGTAACAGA
TCGCACGATT CGCAGAAAGT CATGGATTTC TTGCGTGGTA GAGAGTGGGG TTTCATCATC
TTAGATGAAG TTCATGTTGT ACCAGCTGCA ATGTTCAGAC GTGTGGTAAC CACCATTGCT
GCCCATGCAA AGTTGGGTCT CACAGCTACT TTGGTCAGAG AAGACGACAA GATTCACGAC
TTGAACTTCT TGATCGGCCC AAAGTTGTAT GAAGCTAACT GGATGGACCT TGCACAAAAG
GGGCACATCG CCAATGTCCA GTGCGCTGAA GTGTGGTGTC CCATGACGTC TGAGTTCTAC
CAGGAGTACT TGAAGGAATC GGCCAGAAAG AGGATGTTGT TGTACATCAT GAATCCCACA
AAGTTCCAAG CTTGCCAGTT CTTGATTCAC TACCACGAAA AGAGGGGTGA CAAGATCATT
GTTTTCAGCG ACAATGTGTA CGCTTTGCAG GAGTATGCAT TGAAGTTGGG TAAGCCTTTT
ATTTATGGGT CGACGCCACA ACAGGAAAGA ATGCAGATCT TGCTGAATTT CCAGCACAAT
GATCAGATCA ACACTATCTT CTTGTCGAAG GTCGGTGACA CATCAATTGA TTTGCCAGAA
GCCACATGTT TGATTCAGAT CTCGTCTCAT TATGGGTCTC GTCGACAAGA AGCTCAGCGT
TTGGGTCGTA TCTTAAGAGC TAAGAGACGT AATGATGAAG GGTTCAACGC CTTCTTCTAC
TCATTGGTAT CCAAGGATAC ACAGGAAATG TACTACTCCA CCAAGAGGCA AGCATTCCTT
GTAGATCAGG GTTATGCATT CAAAGTTATC ACACACTTGA GTGGTATGGA GCAGTTGCCC
GACTTGGCTT ACTCTTCACC CAGAGAAAGA AGAGAGTTGC TTCAACAGGT GTTGTTGAAG
AATGAAGATG CTGCTGGACT TGAAATCGGC GACGATGTCG ATACCAATTT CATTTCCAAT
GACACTAGAA TGAAGTTAGA GAACGCCAAC GCTAGCAGAA CGACAGGTTC ATTGGCCGGT
TTGGCCGGTG GGGAAGATAT GGCCTACATC GAATACAGCA AGAACAAGAA CAAGGAGCTC
AAAGAACACC ATCCTTTAAT CCACCAGATG TATTATAAAA AGCAGCAAAA AAAGTAGATA
GGTTAATGGG AATTGGGATT ATTTAATTTA CATACTGGTA TATATTTAAC ATACAAATAT
ATTAATTTAC
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| Protein sequence | MSYRRPGGIN YAELDQGNYS DDDSFEDEPQ SRSKDDDYSY GTRNPKKKSS NASASSKKRK
AEQSIETIRA EVNDTVYSDD DLVELTPDIP SDYVPDAVSK VFGKSDYSYL KLKPDHFSRP
IWMSPDGRII LESFSPLAEQ AQDFLITIAE PISRPSHIHE YRLTPYSLYA AVSVGLETDD
IISVLSRLSK VPVAEKVVEF IKSATISYGK VKLVLKHNRY FVESTQADIL QMLLKDEVIG
PLRIQSSENT VTSNGLVKSA APTKGDMVIP GTKKNNESDE KKKDTEDIYA SVVGSRNDED
DYDVDAVHSF EIANESVEIV KRRCQDIDYP VLEEYDFRND ARNPDLEIDL KPSTQIRPYQ
EKSLSKMFGN GRARSGIIVL PCGAGKTLVG ITAACTIRKS VIVLCTSSVS VMQWRQQFLQ
WCTIQPENVA VFTSENKEMF TSESGLVVST YSMVANTRNR SHDSQKVMDF LRGREWGFII
LDEVHVVPAA MFRRVVTTIA AHAKLGLTAT LVREDDKIHD LNFLIGPKLY EANWMDLAQK
GHIANVQCAE VWCPMTSEFY QEYLKESARK RMLLYIMNPT KFQACQFLIH YHEKRGDKII
VFSDNVYALQ EYALKLGKPF IYGSTPQQER MQILSNFQHN DQINTIFLSK VGDTSIDLPE
ATCLIQISSH YGSRRQEAQR LGRILRAKRR NDEGFNAFFY SLVSKDTQEM YYSTKRQAFL
VDQGYAFKVI THLSGMEQLP DLAYSSPRER RELLQQVLLK NEDAAGLEIG DDVDTNFISN
DTRMKLENAN ASRTTGSLAG LAGGEDMAYI EYSKNKNKEL KEHHPLIHQM YYKKQQKK
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