| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82713 |
|---|
| Symbol | |
|---|
| ID | 4838092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | + |
|---|
| Start bp | 1271722 |
|---|
| End bp | 1272657 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640389407 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001383528 |
|---|
| Protein GI | 126134007 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0184174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.129752 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TATAAGCAAA CTATATTGCG AGAAATTGGC ACGAAAAACG GTATTTTAAC CCCAAGTTAA
TTCAGCTAAA TTTCTAAACA TTTCACTTTT GCTTTCTCAA ACTCACATTT GTTTTTCATT
TTTCACTAAA TACTTCATAT CACATAATGG CTGACAGATA CTCGTTTTCG TTGACGACGT
TTTCGCCTAG CGGGAAGTTG GTCCAGATCG AGTATGCTCT TAACGCAGTC AAACAGGGTG
TGACCACCAT CGGGATCAAG TCCGCCAACG GTGTTGTTCT TGCCACAGAG AGAAAGGCTA
ATTCTCCACT CATAAAGAGC GATACCAACG TCAAAGTCGA ATTGATCACC CCAGACATCG
GCATGACATA CTCCGGAATG GGACCTGACT TCCGAGTACT TGTAGATAGA GCACGGAAGT
TGGCACACAC TAATTACAAG CGGATTTACA ACGAATATCC TCCTGTAAGA ATATTGGTTC
AGGAGATCGC CAAAGTTATG CAAGAATCCA CTCAGTCTGG AGGTATAAGA CCATTTGGTG
TATCGCTTCT TGTTGGAGGC TATGACCAAC ACTCTGAACA GTTCCAGTTG TACCAGGTTG
ATCCCTCAGG TTCTTATTTC CCCTGGAAGG CTACTGCCAT TGGTAAGACT TCCAACTCTG
CGAAAACATT CTTGGAAAAG AGATGGAACG AAGACTTGGA GTTGGAAGAT GCCATTCACG
TGGCATTGCT CGCATTAAAA GAGTCTGTAG ATGGTGAGTT GACAGGTGAG AACTTGGACA
TCGCCATTAT CAGTGATGCT CAGGAACACT TGTTGGGATT CAAAGGTACA AGTTTAGAGG
GACCACGGTA CAAGAAGCTT ACTGCTGAAG AGATCAATGA CAGATTAGAA GCATTGTAGA
GTAAAATTAG TAATGTAAAG AATAAAAAAA TAGTAG
|
|---|
| Protein sequence | MADRYSFSLT TFSPSGKLVQ IEYALNAVKQ GVTTIGIKSA NGVVLATERK ANSPLIKSDT
NVKVELITPD IGMTYSGMGP DFRVLVDRAR KLAHTNYKRI YNEYPPVRIL VQEIAKVMQE
STQSGGIRPF GVSLLVGGYD QHSEQFQLYQ VDPSGSYFPW KATAIGKTSN SAKTFLEKRW
NEDLELEDAI HVALLALKES VDGELTGENL DIAIISDAQE HLLGFKGTSL EGPRYKKLTA
EEINDRLEAL
|
|---|
| |