| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82711 |
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| Symbol | SLA1 |
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| ID | 4837731 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 859519 |
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| End bp | 863481 |
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| Gene Length | 3963 bp |
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| Protein Length | 1151 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389046 |
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| Product | SH3 domain protein involved in assembly of cortical actin cytoskeleton |
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| Protein accession | XP_001383796 |
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| Protein GI | 150864817 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.34948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATCCGACAAT AGAGATGCTG TATATCGGGG TGTACAGAGC GCTCTATGAG TACTCTGCAC
AAGCTGAAGA AGAACTAAAC TTGCAGCCCG ATGATTTGTT GTACTTACTT GAGAGATCGG
ATATCGATGA TTGGTGGAAA GTGAAAAAGA GAGTGTTACC ATCAGGCAAT GAAGAAGTTG
AGGAGCCAGT GGGATTGGTG CCATCCAATT ACATTGAAGA GGTAAGTTAC ACATAAATCT
GAAGAGAGTT GTATGAGCAA TTAACAATTT GAATCCATAG AGCAAATACT AACTGATACT
GCAGGCACCT GTGCTTAAAA CAGCAGCAGC TTTATACGAC TATGACAAGC AAACTGAAGA
TGAACTCTCA TTTGCTGAAG GTGAAATTTT TCAAGTGTAT GATTTGAATG ATCCAGATTG
GATATTGGTA GGCGATGCCA ATAAGCAGAG CTTTGGATTT GTGCCTTCCA ACTACATTGA
TTTGAATGGA CAAGCACAAG CTCCACCACC ACAAACACAG CCACAGCAGA AACAACCTGT
TCCTATCAGC AACTTTGCTC CTCCTCCGGT TCATAAGGAT AGAACGGTTT CTCCAGAGGC
TGAACCTTTC GAAAATCACG TACCAGAACC TTCATCAGCT CGTCCTCCAG CTGTGTCTCA
GACTTATTCG TACGAACAAA GCCCATACAG ACAAAGAGAA GTGGACGTGG ATGGGAACGA
CGACGAGGAA GAGGCACCAC CACCAATGCC GTCTAGACCT GTTGTGGCCG CTGATAAGCC
AGTTCCAGAG CTCCCTCCCA GTGGTCAGAA TGAGCGCGAA GAAGATCTTC ATACTGGTGG
TCAGGAACAT AAGTTTGATG GTGAGTTCTT CACATGGTAC ATTGACGAAG TAGACGGTCG
TAAAAAGCGG TCTGTTGTAT TTTCTATTGG CCAAGGTATG ATCATAATTA GACCTAATAC
GACCAGTCCC AAGAAACTCA GACTTAAGTC TTCGTCTTCT TCCATAGATA ACCAATGGCG
AATTAAAGAT TTAATCGATT TTAGCCATGA GAAGAAGCAT GTATTCTTGG AATTCAAGAA
TCCCAAGACC TCTATTGAGT TACATGCTGG ATCCAAAGAC GTTGCTGAAG CCATAATGTC
TATCGTTGGG GATCTTAAAG GAGCCGAGTC TGCTCGTGGG TTGAAGGAAG TAGCTAGAGC
TTCACACGCC AGTACCGGAG AAAACAATAG AAAAATGGGT AGATTAATGT TTGATTTTGA
GGCCCAGGGT GATGATGAAT TGATGAGTAG AGAAGGCGAC GAAGTCTATA TTATAAATGA
GACCAAGTCT AAGGATTGGT GGATGTGTGA AAATATCGAT TCTGGAAGAC AAGGCGTAAT
TCCATCTTCT TACATCGAAA TAATTGGTAC TTCCAATTTA GATAAATTGA CAGATGGACC
CCAGAGAAGA AAGTCAAACA AACGGAGTAG TACCAAGGGA AGGGTTGTGG ACAACAATAA
AGAGCATCTG CATCATCATC ATAATCGTGG CAGAGAAGAA AGAGACAAGA TTAGAGAAAA
GGATAGGATT CAAAGGGATA GGAAGCATAC CTCATCGAAG GATGAGCAGA ATGATAAATC
AATGCCAAAC TACCACAGAG TCAGAACCTG GATCGATAGT TCTGGCTCGT TCAAAGTTGA
AGCTGAGTTC TTGGGATGTG TTGAAGGAAA GATCCATTTG CACAAGACGA ATGGAGTAAA
GATTGCTGTA TCTGCGACAA AGTTATCGAT TGAGGATTTG GAGTACGTTG AAAAAGTTAC
AGGCACTTCT TTGGAAACTT ACAAGCAAGA GGTCAATAAA CAAATGTTGA AGAGATCCAA
ATCTAACAAG TCTCCATCTA AGAGCGGTAC TAATGAAGGT TCATCTGGGG CTATTAATGG
CAGTTCTGGA GCTAATGGTG CTATGGCTGT TACCAAGTCT CATTCTGCTA CTGCTACTAT
TAACAATATC ACACCACCAC AACCTTCCAG ACCCAAAGCC ACTACCAAGG TTACTACGAC
GAGTGAACCA GAATATGACT GGTTTGAGTT TTTTCTTCAG TGTGGAGTGG ATATTGGTAA
CTGTCAGCGT TACACTCTTA ACTTCAACAG AGAGCAGATT GATGAAAACA TCTTGGAAGA
CATCACACCT TCTCTTTTGC GTACGTTAGG ATTGAGAGAA GGTGACATCT TAAGAGTTAT
GAAATTCTTG GACAATAAGT TCAACAGAAA AAAGAGTACT TCTGAAGAAA CAGCTCCTAC
AGGTGGACTT TTTATTGACC CTAATGGAGC CTTGAAGAAC AACAGTTCAA GTGCTGAAGT
TTCGAAGGTG AATGCCAGTG CTTTGCCATC TCCTAACAAG GTGGCAGAGC CGGCCCCAAA
GGAAGCTGTT GCACCTGTTG GATTAACTCC TTCGAAGCAA TTTGAAGACG ACGCTTGGGC
TGTTAAGCCC GCAGCCAGGT CTACAGACGA TCTTTTAAAA CCAAGTTCTC AACCTCAGAC
TCCTCAATAC ACTGGTTCAT TACAAGATTT GGTGAATATC AAGCCATTAG ATCTGAGCAA
TAATGCTTCA AGGCCCGTTC CACCAAAACA GGTTGACGGA CCATCGGCAC CTGCATTAGC
ACCAGTCAAG ACTGGTACGT TGATTCAACC AGGGCAGCAG TTTGCTGTTC AAAAGCCAAT
CTCAACGCAG GCTACTGGGC CACTTATTCC CGTTCAAAAG ACTGGTTTGG TGCCTATTCC
TACTGGAGGA TTGATGACAG CTCAACCTAC TGGGTTTGTA CCAATTACAG CTCAGCCCAC
GGGATTCATT CCAATTCAAG CCACTGGAAT TTTACAACCT CAACTTACGT TTGGTATTGT
TCCATTGCAA ACTGGAAATG CTACATTTGT GCCACAGAAG ACGGGACCAC AGAACGGTCC
TCCACTCACT ACTTTTGGAC AGCCAATTGT AGCCATGCCG CAGACTAGCT TTGGTCAACC
TGTGTTTGTG CAAGCAACTG GACCATTACC AGGACAGATT ACTGGCGGCC TACCACAGAC
TAGTTTCAAC AATCAGCCTT TAGTTCCTAT TCAGAGAACT GGGCCATCAG TTGTTCCAGC
ACAAAGAACT GGAGGTTTTG TTCCACAGTC GGCATTTGGC CAACAAATAA CGGGAGGATT
TGCTGCTAAT CAACCTCCTC CGAACACCTT TAGTCAACAG TTAACAGGGG GATTGCCTCA
AACATCGTTT GGAAATCCTA CTGGAGGAAG CTTGTACAAC CCAGTTGTTC AGCAACAGCC
AGTCGCAACA TTTGGAGGAC AAACCACAGG TGGTTTCCCT CAGACATCGT TTGGACAACC
CCAGCAAAAT GGGTTTTCTC CATTTGGACA GCAGCAGCAG CAACAACCAC CTCAGTTACA
ACAGGCCACA ACATTTAGCC TGTTGCCTGT ACAACAACAA CCTACATTCC CACTGGTACA
ACAACAACCT ACATTCACCC TGGTTCCACA GCAACCTGCA TTTAACCAAT TTGCTCAACA
ACCACAGCAG ACTGCTTTCA ACCAGTTTGG CCAACAGCAG CCTAACATGA ACCAGTTGAG
TAATATGTTC CAAAACACCA ATATAGCTCC AGTAAACAAC TTTGCTCAAC CACAGCAAAC
TTACCCAAAC ACTTCATTTG GTGTTCAGCC ACAGCCACTG TTTGAAGGCT TTAACAACCA
ACCTTTGCAG AGTCAACCTA CTGGGGTTGG GTTTGGAAAT GCTCCATTGC AGACACAGCA
GACTGGCGGT AGAAGAGCCA ATCTTTCTGC TGCTACACCT GATAATCCTT TTGGATTCTA
AGAATAATAG GGTCTAAAAG AATTGCAGTA TAGAATTCGT TCGATTTACA TATGTCATCT
ACCTCTACAA GTTAGCTTCT TCTACAAGGC AACTCTTCTA AAGTCATCAT ACATCTATAT
TTC
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| Protein sequence | MSYIGVYRAL YEYSAQAEEE LNLQPDDLLY LLERSDIDDW WKVKKRVLPS GNEEVEEPVG
LVPSNYIEEA PVLKTAAALY DYDKQTEDEL SFAEGEIFQV YDLNDPDWIL VGDANKQSFG
FVPSNYIDLN GQAQAPPPQT QPQQKQPVPI SNFAPPPVHK DRTVSPEAEP FENHVPEPSS
ARPPAVQREV DVDGNDDEEE APPPMPSRPV VAADKPVPEL PPSGQNEREE DLHTGGQEHK
FDGEFFTWYI DEVDGRKKRS VVFSIGQGMI IIRPNTTNNQ WRIKDLIDFS HEKKHVFLEF
KNPKTSIELH AGSKDVAEAI MSIVGDLKGA ESARGLKEVA RASHASTGEN NRKMGRLMFD
FEAQGDDELM SREGDEVYII NETKSKDWWM CENIDSGRQG VIPSSYIEII GTSNLDKLTD
GPQRRKSNKR SSTKGRVVDN NKEHSHHHHN RGREERDKIR EKDRIQRDRK HTSSKDEQND
KSMPNYHRVR TWIDSSGSFK VEAEFLGCVE GKIHLHKTNG VKIAVSATKL SIEDLEYVEK
VTGTSLETYK QEVNKQMLKR SKSNKSPSKS GTNEGSSGAI NGSSGANGAM AVTKSHSATA
TINNITPPQP SRPKATTKVT TTSEPEYDWF EFFLQCGVDI GNCQRYTLNF NREQIDENIL
EDITPSLLRT LGLREGDILR VMKFLDNKFN RKKSTSEETA PTGGLFIDPN GALKNNSSSA
EVSKPAPKEA VAPVGLTPSK QFEDDAWAVK PAARSTDDLL KPSSQPQTPQ YTGSLQDLVN
IKPLDSSNNA SRPVPPKQVD GPSAPALAPV KTGTLIQPGQ QFAVQKPIST QATGPLIPVQ
KTGLVPIPTG GLMTAQPTGF VPITAQPTGF IPIQATGILQ PQLTFGITSF GQPVFVQATG
PLPGQITGGL PQTSFNNQPL VPIQRTGPSV VPAQRTGGFV PQSAFGQQIT GGFAANQPPP
NTFSQQLTGG LPQTSFGNPT GGSLYNPVVQ QQPVATFGGQ TTGGFPQTSF GQPQQNGFSP
FGQQQQQQPP QLQQATTFSS LPQPAFNQFA QQPQQTAFNQ FGQQQPNMNQ LSNMFQNTNI
APVNNFAQPQ QTYPNTSFGV QPQPSFEGFN NQPLQSQPTG VGFGNAPLQT QQTGGRRANL
SAATPDNPFG F
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