Gene PICST_82710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_82710 
SymbolINP52 
ID4838328 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1485932 
End bp1489480 
Gene Length3549 bp 
Protein Length1118 aa 
Translation table12 
GC content40% 
IMG OID640389643 
ProductInositol-1,4,5-triphosphate 5-phosphatase 
Protein accessionXP_001383905 
Protein GI150864900 
COG category[T] Signal transduction mechanisms 
COG ID[COG5329] Phosphoinositide polyphosphatase (Sac family)
[COG5411] Phosphatidylinositol 5-phosphate phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0595728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.124532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGTCAACATC ATCATCAACA TCAACTGGCG GTTGCATATT TGTATAGAAT TGTAGTGTAA 
TGAAGTTGCT ATATAAGGAC AGTCCTCGTA CCATTGCACT CTGTTCAGAG ACTCACGCAC
TCTTACTTCG ACAGCTGAAG AAAGCGTCGA AAGTCAATGT TGAAATTGCG TCCAACAGCC
ATGTCACTAA AGAACAAGGG TTCCGCACAT TGATTAAGAG GGAAGTGTTT GGATGTCTAG
GTTTGATCCA TTTGGACCAT CAGGTATTTG TGGCTGTCAT CACTGGTGCC ATACTTAACG
TGGCGAATCC AGTCAACTAT GAGACAGTGG ACAAAATTTA CTCTGTTGAT TTCATATCAT
TAGCTTCTGA CGAATGGGAC TTCGCTAACT TGGATGCTAA CGGAATCCCA ATAGCTGTTG
CTGGATCTGA AGAAGACAAC GATTACGCCA GAGAGGTACA TCCTTGCCAG GAGTTGAAGA
AGTTATTGTC GAATGGCTCA TTCTACTATT CTAACGACTT TGATTTGACT TCTCTATTGC
AGAACAGAGG TATCTCCAAT ACTAAATTAT TTGAAGGAGC AAGTCGTACC AAACCTACCA
AGACTGTAGA GCACTACCAA AAAGAGTACA TGTGGAATTC GTTTCTTATG GATGAATTGC
TCAAATTCAG ATCGAACTTA GATCCCTATG CCCAAGAGTC CATGGACAAC AACCATTTTC
TCACTACTGT AATCAGAGGG TTTGCCAAGA CTGTAGCTTT GAACTCCTCT CAAGATTCTA
TCACTGTGAT TTCAAAGCAA TCATGGAAAA GAGCTGGAAC AAGATTCAAT GCTCGTGGTA
TTGATGACAA TGGTAATGTA GCCAACTTTG TTGAGACAGA ATTTATATAC TTTCATCCAA
CTCAGTCTTC GATTTTTTCA TTCACGCAGA TTAGAGGCTC GGTGCCAACA TTTTGGGAAC
AGGATTCAAC TTTGATTAAT CCTAAGATCA CTTTGACGAG ATCCTTAGAA GCAACTCAGC
CAATTTTCGA TAGACATTTC ACAGAAGTAT GTGAAAAGTA CGGAGTCTGT CATATTGTGA
ACTTGTTATC CAAAACCAAG CCAGCTGAAA TTTCTGTTTC AAGGAGATTT CGTGATTTGT
ACGACGATGC AGAACGTAAG GAAGAGATCT CCTATACAGA GTTCGATTTC CATCATGAAA
CAAAACAAAG TGGAGGTTTT GCCGGAGCAA CAAAAATCCT TCCCTTACTT AGAGATTCAC
AAGAACAATT CGGTTGGTTC GTTTATGACA TTGAACAAGA GGAAGTTGTG ACCCGTCAAG
ATGGTGTGTT CAGAGTCAAT TGCTTGGATT GTCTTGACAG AACAAACTTG ATCCAGCAAG
TTATTTGCAA GAATGTATTG GACAGTATTT TGCAAAATCA ATCGTCTGGA AGCCATCGTG
ATAGATTGGT GAATGAGGAT ATAATCATAA AGCACAATTC ATTATGGGCC GATAATGGTG
ATGCCATCTC CCAAATCTAC ACGGGTACAA ATGCCCTTAA GTCTTCGTTT TCAAGATCTG
GAAAGATGAA TTTTGCAGGA GCTTTGTCTG ACGTTACCAA ATCAGTGTCT CGTATGTACC
AGAACACTTT TGTTGATGGT AAGAAACAAT CAACTATGGA TGTTTTATTA GGCTACGATG
CCAGAACGAG ACCTGTAAAA ATATTTGATC CTATCAATGA TTACGTCAAC GAACAATTGA
AAACACAGTC CAATCTATTC ACTACTTGGA ATAATATTAC GGTATTCGCT GGTACATATA
ATTTAAATGC TTTGGAACCT GGTGCTAGAC CTGTTGATTT GACTGGATGG TTGTTCCCAC
CCGAAAATTC TAGTAGTGAA CTACCCGATA TCTTTGCCAT TGGTTTCCAG GAGTTAATTG
AGCTCAATGC TGGGGGAATG TTGAATGCCG ATCCTTCAAA ACCATTGAAG TGGGCAAAGA
TCTTGAATGA TCAGTTAAAC TCACAAAAGG AACAATATTT GCTTTTGAGA ACAGAATCAA
TAGCTTCTAT GTCCTTATTC TTGTTTGCAA AGAAATCTCA AGTGCACAAT GTCACACAAG
TGGCCGGATC TTCACGGAAG ACAGGTTTAG GAGGAATGAC TGCTAACAAA GGAGCTTGTG
CTGTAAGATT TGAATTTGGG TCTACATCGT TTGCTTTAAT TACATCCCAT TTGGCTGCTG
GTACTACTGC AGTTGTTGAA AGATTCAACG ACTATTCTAC AATCATGCAA GGGTTGACAT
TCACAAGAAA TTACACCATA AAAGATCACG ACCATGTGAT CTGGTTTGGA GATTTGAACT
ACAGAATCTC GCTAGCAAAT GACCAATGCA GGTCGCTTAT TGAACATGGT GCATTCGATG
AGTTGCTTGC TGTTGATCAA TTGAATGAAG AAATATCTCT GAAGGGTGCA TTTCATGGGT
TCAAAGAAGG ACCGATCAAG TTTTATCCTA CTTACAAGTT TGATAAGGGC ACTTCTGATT
ATGATACATC TGAGAAGCAA AGAGTTCCAT CTTGGACGGA TAGAGTCCTT TATTTGTCAG
CTAAGGATAA AGAGAGTTTG AAGCTTCTCA ACTATAACTC TGTTATGGAT ATCTTTGTCA
GTGATCACAA ACCAGTATAT GCCACATTCA ACAGTAAAGT TGAATTCATC GACCAAGACA
AGAAGTTGAA GATGTCTAAG AGTTTGTATG ATAGTTACAA GTTAGAACAT CTCGGTGTTG
GTGAGAATTT ACTAGACATT AGTGCGGCCA ACTCAATCTA TTCCAAGAGT CCGGACCCCA
AAACTAACGG AAACAGTTTC TCCCATGATG TTTTGTCTGA TATGAATTTA TTAGGTGTCG
AAACAGTTTC AACACCCACT TCGGTAAAAA GTGAAATTTC ACCTAGACGA GTTCCTCCTC
CTCCTACTAG CAGAAGACAG GTTGCCACAG ACTTGACAAC TGGAAGAGCC ACGTTACCTA
GAAAGTTACC TCCACCTCCA GAAACCGGCT TTTCTGTGCC TCCTCCCCCA CCAGAAAGAA
AATCAAATGC AAGTCTTGCA ATCCCTACTC CGAGGGTAGT CAATCCTCCA TTTGGATTTT
CTACAACACC ACTCATTCCT AGCAGATCCA ATTCTGCTAC GCCTAACATT TCGTCGCCAG
TATCATCTCC TGTTTTAAAA TCTAATGGGG CTTCACCACT TCACAGGACT ATACCTCCAC
TTCATCCATC ACATCCATCG AACGTGAAAC CATTGGTTCC CTCCAAACCC ACGACTTTGG
CTGCTCCAAA GATCTTGAAG CCGGAAGTAA GCAAATCAGA AACCCATTTG CCACCTCCAC
TTCAAAAGGC AAAAACTGCT GTACCTGCTC CACCTCCTCC AAGATTAGGA GCTTCTGTTA
CACCAGAAAT ACCGAAGAGT ATGTCTGACT GGAAGCCGTT GGTGCCAAAG TAAATTAAAG
ACATTCCACT AATGAATAGC ATGTACGTTT TTAAAATATG TTACGTTTAA TAGAATATAT
ACACATAGT
 
Protein sequence
MKLLYKDSPR TIALCSETHA LLLRQSKKAS KVNVEIASNS HVTKEQGFRT LIKREVFGCL 
GLIHLDHQVF VAVITGAILN VANPVNYETV DKIYSVDFIS LASDEWDFAN LDANGIPIAV
AGSEEDNDYA REVHPCQELK KLLSNGSFYY SNDFDLTSLL QNRGISNTKL FEGASRTKPT
KTVEHYQKEY MWNSFLMDEL LKFRSNLDPY AQESMDNNHF LTTVIRGFAK TVALNSSQDS
ITVISKQSWK RAGTRFNARG IDDNGNVANF VETEFIYFHP TQSSIFSFTQ IRGSVPTFWE
QDSTLINPKI TLTRSLEATQ PIFDRHFTEV CEKYGVCHIV NLLSKTKPAE ISVSRRFRDL
YDDAERKEEI SYTEFDFHHE TKQSGGFAGA TKILPLLRDS QEQFGWFVYD IEQEEVVTRQ
DGVFRVNCLD CLDRTNLIQQ VICKNVLDSI LQNQSSGSHR DRLVNEDIII KHNSLWADNG
DAISQIYTGT NALKSSFSRS GKMNFAGALS DVTKSVSRMY QNTFVDGKKQ STMDVLLGYD
ARTRPVKIFD PINDYVNEQL KTQSNLFTTW NNITVFAGTY NLNALEPGAR PVDLTGWLFP
PENSSSELPD IFAIGFQELI ELNAGGMLNA DPSKPLKWAK ILNDQLNSQK EQYLLLRTES
IASMSLFLFA KKSQVHNVTQ VAGSSRKTGL GGMTANKGAC AVRFEFGSTS FALITSHLAA
GTTAVVERFN DYSTIMQGLT FTRNYTIKDH DHVIWFGDLN YRISLANDQC RSLIEHGAFD
ELLAVDQLNE EISSKGAFHG FKEGPIKFYP TYKFDKGTSD YDTSEKQRVP SWTDRVLYLS
AKDKESLKLL NYNSVMDIFV SDHKPVYATF NSKVEFIDQD KKLKMSKSLY DSYKLEHLGV
GENLLDISAA NSIYSKSPDP KTNGNSFSHD VLSDMNLLGV ETVSTPTSVK SEISPRRVPP
PPTSRRQVAT DLTTGRATLP RKLPPPPETG FSVPPPPPER KSNASLAIPT PRVVNPPFGF
STTPLIPSRS NSATPNISSP VSSPVLKSNG ASPLHRTIPP LHPSHPSNPE VSKSETHLPP
PLQKAKTAVP APPPPRLGAS VTPEIPKSMS DWKPLVPK