| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82669 |
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| Symbol | NSP2 |
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| ID | 4838331 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 690895 |
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| End bp | 695343 |
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| Gene Length | 4449 bp |
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| Protein Length | 1019 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640389646 |
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| Product | Nucleoskeletal protein |
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| Protein accession | XP_001383416 |
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| Protein GI | 150864554 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.744572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AACCAGTCAA CTATCTACAA ATTCCGAGTA TAGCATATTT GCGTGGATTG TCTATCCGGG
TAATACTAAA AATTTGGTTA GAAATTATCA ATATTACTCA GATCGTGATT TATTTCATTC
TCATCTCGAG CTGTCCCTTG AAACAGACAA AGAAAAACTA CATCACAGAA ACTCGTTTAT
AGACTAATAC CTGAATTTGT GATTTTGTTT CCTATTATTC TAGTTGTCGA TTGAGTGTTG
CTGTTCGTAT CATCTAATTG CTTATAGTAT CTATTGTTGA TCATCTAACC AAATAGTAAG
TGAAATTTAC TATTTTGACA TCTACACTGA CACTGAAATT CTATTGTTGT CGATTTCATT
ATGTCCTACA ATCGAAATTC GATAAGCCCT ACAACTGAGG TTTCTTCAGA AGAGACCAAT
TCCTCTAACA CTTCCAATAC AACTGCTCCG TTTGTGTCTA CACTCAAGTC CATATACAAC
TACTTCAAAG ACAAGGTTCC GCAAAGCAGT AGTTTCAAAG GGGTCAACAC GAAGATTTCA
TTTCCAGGCT ATTCTGACGT CAAAATGGTT GTGGACGAAC CATTACTTCA TAATTTCAGT
TCTGAGAAAA GAAGAAGACT TTCAGCAGCT GCGCATTTGT CGAATGGATA TGTTCCTCGT
TCTTCCAGCT TGAAGAACAA CTTGGGGCTC TACCAAAGTT ATAGAAATAA TATTCAGATC
AACGAAGAAG AGAAGAATAA CGATTTGGAA AGAAGACTCA GTACTTCTTA CGGTGATGCC
GTAGTGAAGA ACACAGTTCC TCAGTATATA GAGGTTCCGC GTGTAGTCAA TGGTTCCACG
ATCTCGCGTG ACGAGTCACC TTTACATATT TTACCTTCTA TGGAAAACGG TCTTCTTGCT
ATTGATATGG ATTCTTCCAC CACTGAAAGT TTGGATGGTA GATCAGAAGT TCTAATTGAT
CCAGAGTTCG CACCATTATA TACAGATGAT GAAGGAAACT TGGTGAGACC TCCTTTTATC
AATTTGGATC CTAGAGAAAG ATACCGTCTT CTTCAGTTGA AGAAGTCGAT GCAAGCATCT
GAAGCTTTAC AAAGAAGAAT GAAGTATATG GTTAATCCCA GTGAAACCGT TTCCAAAGCT
ATCAACCCTC AATCTAATAT GGTTGAAACG TCTACACAAA CTCATGATAT CGCCTACGTA
GATAAACTCT TGAAGTTCAA ACAGAGAAGA ATAGCGATCC CAAAGAGAAT CAAGAAGGCT
CATAGGCTCA AGAACACACA AGGCTATTTT GTTGGTGAGT TCTACTATGA CGTAGACAAA
ATAGATGCAA ACAACAAATC TTCCAACATG TTGAATGGCT ATTTAGGAAC AGTAAGTAAG
CCGTCTTTTC ATGACAACAA AACAGAAGAA AAATTTGAAA AGAGTACAAC AAACGCTGAT
GAAAGTGAAC CGTTCACGAA GTTTGGCAAG AGTAACGCTA GAGGACGTTT GGATGAAAAA
ATTTCGAACC AAAAAGATTT GAAGCTTGAT TCTTCATACG TGGAAAAATC CAAGAAATAC
GCTGAAATCA TCAAATTGAA AGAAGATACA CCTGTGGATG AAAAGAAAAA AGAATCGCAT
TCGCTTGGTC CAAGCTCTGG GTTCAAGTTC AATATCAAAG GAGACCAATT AGATTCTATA
ATTAAGAAAC GTGAAGATGA CGATAAGTTG GTAAAACAGG CGAAATCCAA ACTGGCTCAA
ATACCACTTG AACGGCAGAA ACTGAAATCT GATATCAAAT ATTCCTTTGG TGCACAGAAA
GACAAAACTG CTCACAGCAA GATTGAAAAC CCAACGTTGC CCACCTTAAC ATTCGGGAAG
AATGAAGGAA AGAAAGAAGG TTCTCTACTG TCGTCAAGTA AGAATCCAGC ACCTGCACCT
ATTAACTTAG GTAAGAAGGA AGAAATATCT GATCCAAGAC CAAAATTTGC ATTCGGTGAA
TCAAAACCAA CTGAAGTCAC AAAGCCTTCC TTATTTGGAA AATCTAGTGG AACAAGAGAA
TTTTCATTTG GTGCACAAAA GACTGATGAC GACAAATCTT CTAAACCAGC CATATTATTC
GGCTCAATAA ATAAAGATGA TGCTGCCAAA GCACCTGCAT TCTCGTTTGG GTTATCAAAG
GACGGATTAC CCGACGACAA GCAAGATAAG CCAACTCCCT CTATTGGATC TGGAAAGGAA
ACGGATCAAG GGTCTAGAAA GCGAAGCGAA GAAACATCTG CATTTTCTTT TGGGCAAAAG
AAAGACGAAA CTACGTCTGC TCTGAGTCTC TTTGGAAATA TCTCTAGCAA AAACGGAGAA
CCAAAATCTG ATAAGCACTT CTTATCTAGC GGTGCGGAAA AGAAAGAAAT AACACCAAAG
TCGACATTCA CATTTGGTGA TAAAAATACA CCCCCTACTT TGTCATTAGA AAAGGAGAAG
AAGGATCAAA TTATTTTTAG TAAACCAGAT GAAAATTCCA CCGATAAGCC AGCATTTTCA
TTTGGAGCAC CAATCTCAGA AAAGAAGACT GAAGGCTTTA CATTTGGAGC ACCAAGCTCA
GAGAAGAAGA CTGAAGGCTT TACATTTGGA GCACCAAGCT CAGAGAAGAA GACTGAAGGC
TTTACATTTG GAGCACCAAG CTCAGAGAAG AAGACTGAAG GCTTTACATT TGGAGCTCCA
AGTTCGGAGA AGAAATCTGA AGGCTTTACA TTTGGAGCTC CAAGTTCGGA GAAGAAATCT
GAAGGCTTTA CATTTGGAGC TCCAAGTGCA GAAAAGAAGA CCGAAGGCTT TACTTTCGGA
GCTCCAAGCA CAGAGAAAAA GACTGAAGGC ATTACATTTG GATCTGAGAA ACCAGCAAAA
TCATCTATTT TTGGAGATTC AACTGGAGCA CCAAAATTTT CATTTGGTAA TGTTGACAAA
CCACAAGAAA CTAAAGCCTC TGCTGCAATG ACTGGATCAA CATCTTTAGG TACTACTACG
CCTTCATTAA GTAAACAGAC ATCTCCTGCG TTTTCGTTTG GTTCTGCTGC TGATGATACG
GAAAAGGAAG AATCTCGGGG TAAAAGAACC AGACCTGCAT TTTCCTTTGA TTCTACTGCT
GCTACAACTC CAGCAGCTAA GCCAACATTT TCTTTGGGTG AATCTAATTC AACTCCTAAA
TCTGGCTTCT CTTTTGCTGC TACTGCTAAA GCTGCCACTC CTGTAACTAC ATTTGGCACT
GGTACACCAC AAAACTCGTT TGGCTTTTCG CAGCTGTCGA TTCCAAATTC GAACTCTAAC
TTCAAATTTG CTCCCGGAAT AACACCTACT GGCGGTGCCA GTGGAGGTTT CAAGTTTGGA
GCTGCTGCAG CTCCAAGTTT TGGTAGTAGC AGCAATATTA ATAATTCTAG CAATACTGGC
TTGAATGGAG GACTAAGTAG ATCTGCTACA CCTACGTTCT CGTTTGGTAA TGCTAACGCA
ACCGCTAATC CTGCCGCTGC TTCAACGAAC ACGGCTGCTG CTAATCCTGC TGCTATTTTT
GGACAATCTT CAAGTGTTCC ACAGTTCAGT TTTGGAGCTC CTACCAGCAA AGAAGCTACG
CCAGATCCCG CATCCGTATT TGGTATGAAC AATAGCAATG CCAATATGGG AAGCAGAGAA
GCCACCCCGT TTGCGTTTGG AACGGGAACC GGTGTCAGCA ACCCAGCCTC TGTGTTTGGT
AACCCTGGCA ATGCTATCAG CATGCCAGCA CCCACGGCTG GATTTGGTGG AACTCCAGCA
TTTGCGTTTG GAGGTGTCAA TGGCGGTGCA GGAGGATCTT TGGCTCCCAA CCAAACACCT
ACTCCACCTT TGCAGGGCCG AATGATTGCG CGCATGCGAC AGAGAAGAAG ATAAGAGTAG
TGGGGTACAT GGAAGTGCTA GAGAATAGAA CAAGGTTAGA GTAATAAGCG AGGTACGATA
TAGAACACAA TGTCGTACAA AATGTAGATG ATTACGCTAA AAATATCGAC AGTGTAACAC
ACTTGACCCC AGTGGATAGG CAGAGACTCC AGAGATACAA AGAAAGTTAA TCCTTGCTCA
GATGACTTTT ATGCGATAAA GACATTGTAT TCGAGATTTG AATTGAATTT AGGCATTATT
CAAAGTGGAA TTTAGGCATT CTGTCAAGTT GGTTCTCCAC GCTTTAGTCA TATGGAGAAG
TTAGATACCG GCAATAGTTT CAGATGAAGG CGACATGTGA CATAACTGTC ATGTGAAGGT
TTTGATTACC CCGATCATCA GTTTTGCAAG CAGGAAAACC CACTATTTCC TAATGGGGCA
ACTTTATGGG GGTGGAGCTG GGACGGTTGA ATTTAAGGAA TTGCCAGAGG AGTGGGCAGT
TGAATGGAGT AGATGAAACT AGTTCCAGTC ATTGACAATA CAGTTAGGTA GTAATAAATA
TGAAAGTGT
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| Protein sequence | MSYNRNSISP TTEVSSEETN SSNTSNTTAP FVSTLKSIYN YFKDKVPQSS SFKGVNTKIS
FPGYSDVKMV VDEPLLHNFS SEKRRRLSAA AHLSNGYVPR SSSLKNNLGL YQSYRNNIQI
NEEEKNNDLE RRLSTSYGDA VVKNTVPRVV NGSTISRDES PLHILPSMEN GLLAIDMDSS
TTESLDVLID PEFAPLYTDD EGNLVRPPFI NLDPRERYRL LQLKKSMQAS EALQRRMKYM
VNPSETVSKA INPQSNMVET STQTHDIAYV DKLLKFKQRR IAIPKRIKKA HRLKNTQGYF
VGEFYYDVDK IDANNKSSNM LNGYLGTVSK PSFHDNKTEE KFEKSTTNAD ESEPFTKFGK
SNARGRLDEK ISNQKDLKLD SSYVEKSKKY AEIIKLKEDT PVDEKKKESH SLGPSSGFKF
NIKGDQLDSI IKKREDDDKL VKQAKSKSAQ IPLERQKSKS DIKYSFGAQK DKTAHSKIEN
PTLPTLTFGK NEGKKEGSLS SSSKNPAPAP INLGKKEEIS DPRPKFAFGE SKPTEVTKPS
LFGKSSGTRE FSFGAQKTDD DKSSKPAILF GSINKDDAAK APAFSFGLSK DGLPDDKQDK
PTPSIGSGKE TDQGSRKRSE ETSAFSFGQK KDETTSASSL FGNISSKNGE PKSDKHFLSS
GAEKKEITPK STFTFGDKNT PPTLSLEKEK KDQIIFSKPD ENSTDKPAFS FGAPISEKKT
EGFTFGAPSS EKKTEGFTFG APSSEKKTEG FTFGAPSSEK KTEGFTFGAP SSEKKSEGFT
FGAPSSEKKS EGFTFGAPSA EKKTEGFTFG APSTEKKTEG ITFGSEKPAK SSIFGDSTGA
PKFSFGNVDK PQETKASAAM TGSTSLAKPT FSLGESNSTP KSGFSFAATA KAATPVTTFG
TGTPQNSVPQ FSFGAPTSKE ATPDPASVFG MNNSNANMGS REATPFAFGT GTGVSNPASV
FGNPGNAISM PAPTAGFGGT PAFAFGGVNG GAGGSLAPNQ TPTPPLQGRM IARMRQRRR
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