Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_82654 |
Symbol | PHO8 |
ID | 4838063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 1115724 |
End bp | 1118073 |
Gene Length | 2350 bp |
Protein Length | 560 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640389378 |
Product | vacuolar alkaline phosphatase |
Protein accession | XP_001383845 |
Protein GI | 126134641 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1785] Alkaline phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.134835 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CTTCCCAGGA CTTCCATCTT CTCAAGTTTA TACCTGTAAT ATATACGACA AGTGAAAATG GCCCAGAAGG AAAGTGACCC GCTTTTGGGC GGCGAAATCG TCGAGAACAT GTCTGTCTAC AACAGTAAGA ATGTCAAAGG GAGTGATAAG AACAAGAAGA GATTATCGCT TTTGATCCAT TTCGTGACCA TCTCTCTCTT GGGCTACTTA TTCTTCTTCG GTAGCTCCAG ATCTAGCGAA ACTGCCAAAG TCGATCCCTT CAAGAAGAAG AACGTCATTT TCATGGTCAC GGACGGAATG GGACCTGCCT CGTTATCGTT GGCCAGATCC TTCAGACAGC ACAGAGACCA GTTGTCTATC AACGACATCT TGACCATAGA CAAGTACTTG ATCGGCTCGT CCAGAACGAG ATCCAGCAAC TCGTTGGTCA CTGACTCTGC TGCTGGCGCC ACAGCCTTTT CTTGCGCCTT GAAGTCGTAT AATGGAGCCA TTGGTGTCAC TCCTAACAAG CAACCATGTG GTACTATTCT TGAAGCCTTG AAGTTGCAGG GTTACATGAC TGGTTTGGTA GTGACTACCA GAATCACCGA TGCCACTCCT GCTGCCTTCA GTGCCCATGC TGACTACAGA TTTCAAGAGG ACTTGATTGC CCAGCACCAA ATTGGCGAGT ATCCCTTAGG AAGATCTGTA GACTTGATCT TGGGAGGAGG CAGATGCCAC TTCTATCCAT CTTCAGTTCC TGGTGGATGT CGCTCTGACG CCAGAAACTT GATTGAAGAA GTTCAGGACG CTGCAACATG GAACTACGTT GGCAATAGAC AAGAGTTTGA CCTTTTGCAA CAGGGCCACA ACGTTTCTTT GCCATTATTG GGCTTGTTGG CCGACACAGA CATTCCGTAC GACATCGATC GCGACTCTAA AGTGTACCCT TCTTTGGCTG AGCAGGTCCA GGTCGCTTTG ACTGCTTTGA CTAAAGCTAC TGAAAACTCC GATAAGGGTT TCTTCTTGTT GATTGAAGGT TCTAGAATCG ACCATGCCGG TCACCACAAC GATCCTGCTG CCCAGGTAAG AGAAGTTTTG GCTTACGATG CTGCTTTCCA GGAAGTTATT AGATATATTG ATGAGTCAGA AACAGAAACT GTAGTTATTT CTACTTCTGA CCACGAAACA GGTGGTTTAG TCACTGCTAG ACAAGTCACC GAGAACTACC CAGACTACCT CTGGTACCCA GAAGTTTTGT TAAAGAGCTC CCATTCTGGT GACTTCTTGG CACACAAGAT CGTTTCTTTC AAGGACAAGA ACGATCTCAA GGCTTTGGAG AAGTTTGTCA CCAAGGAAGT CTTGGAAAAG GATATGGGCA TAACTTCATA CACTAAAGAG GAAGTGAAGC AGATTATTGA CAAGCGTAAC GACCAAGGAA GATTATTGTA TGTTTTGAAC AACATCCTTT CGTTGAGATC CCAAACTGGC TGGACCACAC ATGGCCACTC TGCTGTTGAT GTCAATATCT ACGCCTACAC CAACTCCCCA GCCATCAAAA AGAAGCTTTA TTCCCATAGA GAATACGAGG GCTTGTTAGG TAACCACGAG AACATTGAAA TTGGTGCATT CTTGGAAGCT ATCACTGGCG TCGACTTACA GAAGGTCACC AAGTTGGTGC AGAACACCGA ACATTCTCCA AAGAAAGCCG GCGCAGATCA GTATTCGGCA GACGAATTTC ACCACAATCT CTACCAATAA GTTCATTTCC CCTCAGTGAT TCATTCGTTC GCTCATATCC ATTACTATTC TACAATATAA ACTGTCATGA TGTATAAACT ATCATAAAAT TTAGAAACCG CCATTATACT ATTACTACTA TAAAGTTACC TTAATACAGT TAAATCTATT CTTCATTCCA CTGCATAGCC ACATTCCAAT GGCATGCTAT TCTAATAGAA TTGTTGTATG TATTCTTCTG TTAATGCTAG CTTTTAAATT CGTACTCCAT TGGAGCCGCA CCGTCGCAGA GTTTCAATTC TAACTTTGCC AAGAGTGTTC CATGCTAAGA AATTTATCTC TTTATTGGTA TTCCTCTAGG ATCAGTTGAC CAATTGAATT CACCACTGGC CCCCATGTGC CCTCTTATAA ATCCGTATTT ACGAACTGAT GGCGTAGTCG ACGAATATAG AGTTGAACAA TTAGAACAAA CAATCAGAAC ATCGACTTCC GGTCAATGCT AAGAAAAAAT TGCAGTGGCT CCAGTGTCTG GTATGGATGC CCCTAATATC CATACCTCCT TGCCAAAATG TCTTGGTAGA AACGTTTCTC TCCCAATTCT CTTGACCAAG AATGAAGTAT TATTTGTAAG
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Protein sequence | MAQKESDPLL GGEIVENMSV YNSKNVKGSD KNKKRLSLLI HFVTISLLGY LFFFGSSRSS ETAKVDPFKK KNVIFMVTDG MGPASLSLAR SFRQHRDQLS INDILTIDKY LIGSSRTRSS NSLVTDSAAG ATAFSCALKS YNGAIGVTPN KQPCGTILEA LKLQGYMTGL VVTTRITDAT PAAFSAHADY RFQEDLIAQH QIGEYPLGRS VDLILGGGRC HFYPSSVPGG CRSDARNLIE EVQDAATWNY VGNRQEFDLL QQGHNVSLPL LGLLADTDIP YDIDRDSKVY PSLAEQVQVA LTALTKATEN SDKGFFLLIE GSRIDHAGHH NDPAAQVREV LAYDAAFQEV IRYIDESETE TVVISTSDHE TGGLVTARQV TENYPDYLWY PEVLLKSSHS GDFLAHKIVS FKDKNDLKAL EKFVTKEVLE KDMGITSYTK EEVKQIIDKR NDQGRLLYVL NNILSLRSQT GWTTHGHSAV DVNIYAYTNS PAIKKKLYSH REYEGLLGNH ENIEIGAFLE AITGVDLQKV TKLVQNTEHS PKKAGADQYS ADEFHHNLYQ
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