| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82614 |
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| Symbol | LAT1 |
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| ID | 4838035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 1500863 |
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| End bp | 1502546 |
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| Gene Length | 1684 bp |
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| Protein Length | 467 aa |
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| Translation table | 12 |
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| GC content | 48% |
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| IMG OID | 640389350 |
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| Product | dihydrolipoamide acetyltransferase component |
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| Protein accession | XP_001383578 |
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| Protein GI | 126134107 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.185923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.272647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGTTGTTCAG TTACCGAGTC TCTTCCAGCC CGTTCACAGT ACCGCGTGGA TCTCCATTGA
CACTACAGCC ATCGTTTTGT ACTACACGTC AACTGTCTAG CACTGTATCA TAACTCTTCT
ACCATAACTC TCAGTATGTC TGCCTTATTG TCTGTCTCCA GAGCTGCTCT CTCGGTTGCT
CGTGTTGCTT CCTACAAACA AACCGCCACC GTCTCGCTCC AATGGGCCAG ACTCTACTCC
TCGGGCAAAT TCCCTCCTCA CACCGTCATC AACATGCCTG CCTTGTCTCC TACCATGACG
CAGGGAAACA TTGGCTCGTG GGCCAAGTCT GTTGGTGATG AGTTGACCCC TGGTGAACCT
ATTGCCGAAA TCGAAACCGA TAAGGCCTCC ATGGACTTTG AGTTCCAAGA AGAGGGTTTT
TTGGCAAAGA TCTTGGTCGA CGCTGGAGCT AAGGACGTTC CCGTAGGAAA GCCTATTGCC
GTCTACGTTG AAGAATCCGC CGATGTCGCT GCCTTTGAAT CTTTCACCGC TGCTGATGCC
GGCGAAGGTG AAGCCGCTGC CCCAGTTGAA ACACCAGAGG AAGCTCCAGC TGCAAAGGAA
GAAGCTCCAG CTGCTGTTTC TACTCCAGCT GCTGCTGCTC CTACTTCTGC AAGGGCTCCT
ACTGACAGAA TCATTGCTTC TCCTTTAGCC AAGACCATTG CCTTGGACAA GGGTATCTCA
TTGAAAAACA TCAAGGGATC TGGTCCAAAC GGCAGAATCG TCGCTAAGGA TGTGGAAAAC
TACAAGGTGC CAGCCCCAGC TGCTGCTCCA GCTGCTGCCG CTCCAGCTCC AGGTGCTTCG
TACGAGGACA TTCCTATCAC CACCATGAGA AACGTCATTG CTTCCAGATT ATTGCAATCA
ACTCAACAAT CGCCTTCGTA CATCATTCAG TCGCAGATTT CCGTCACCAA GTTGTTGAAG
TTGCGTGCTT CTTTGAATGC TTCTGCTGAG GACAGATACA GATTGTCTGT CAATGACTTG
TTGATCAAGG CTATCGCTCT TGCTTCCGTG AGAGTACCAG AAGTCAACTC CGCCTGGTTG
GGCGACCAAG GAGTCATCAG ACAGTACAAC AATGTCGATG TCTCTGTTGC TGTGGCCACT
CCAACGGGTT TGATCACTCC AATCGTCAAG GATGCTCACA TCAAGGGCTT GTCTACCATC
TCTAAGGAAG TCAAGGACTT GGGTAAGAGA GCTAAAGAAG GCAAGTTGTC TCCACAGGAA
TTCCAAGGTG GTACCATCTG TATCTCCAAC TTGGGTATGA ACAACGCTGT CACTGCCTTC
ACTTCTATCA TCAACCCCCC ACAGTCTGCT ATCGTTGCTA TTGGTACAAC CGACAAGAAG
GCTGTTCCAT CCAACGTCAA CGAACAAGGA TTCGTCTTTG AAGATGTGAT CACCATCACC
GGTACTTTCG ACCACAGAGT TGTTGACGGT GCTGTCGGTG GTGAATGGAT CAAAGCATTG
AAGAAGATCA TCGAAAACCC ATTGGAAATG TTGATCTAGA CATCTCGAAC TGGCAAAACC
ATCCATAACA TATAAACATA TAATTACGAG AAAAGTAGAA TTAGATCGAC TTTATTCTCT
AGTGTAGTGT TTGTTATCCA TTTACCTCTG CACATATATT CCATAATACA CTATACTAAA
TTGG
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| Protein sequence | MSALLSVSRA ALSVARVASY KQTATVSLQW ARLYSSGKFP PHTVINMPAL SPTMTQGNIG
SWAKSVGDEL TPGEPIAEIE TDKASMDFEF QEEGFLAKIL VDAGAKDVPV GKPIAVYVEE
SADVAAFESF TAADAGEGEA AAPVETPEEA PAAKEEAPAA VSTPAAAAPT SARAPTDRII
ASPLAKTIAL DKGISLKNIK GSGPNGRIVA KDVENYKVPA PAAAPAAAAP APGASYEDIP
ITTMRNVIAS RLLQSTQQSP SYIIQSQISV TKLLKLRASL NASAEDRYRL SVNDLLIKAI
ALASVRVPEV NSAWLGDQGV IRQYNNVDVS VAVATPTGLI TPIVKDAHIK GLSTISKEVK
DLGKRAKEGK LSPQEFQGGT ICISNLGMNN AVTAFTSIIN PPQSAIVAIG TTDKKAVPSN
VNEQGFVFED VITITGTFDH RVVDGAVGGE WIKALKKIIE NPLEMLI
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