| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82404 |
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| Symbol | RAM1 |
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| ID | 4838096 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 1294394 |
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| End bp | 1295885 |
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| Gene Length | 1492 bp |
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| Protein Length | 446 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389411 |
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| Product | protein farnesyltransferase, beta subunit |
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| Protein accession | XP_001383876 |
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| Protein GI | 150864877 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5029] Prenyltransferase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.386583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.138165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAG ACAAGGAAAA AGTAGCTTAT ATCATGAAAC TTCTTGGTAG GAAAAGAGGC
GTCGAGGTCA ATATTTCTCA CGATAACGAT AGCGACCGCG AAATCAACAA ACTTGATAGT
GAAGACGATT TTGAGGACAT TTATTCATCG CATTTGAAAT CCAGTATGAT TCACAAAATA
GCAAACCCCG AGTTTTCGTT CAATCCCCAG GATTCTCCCA TAAAAGACGA CTACATATCC
AAAACTGTAG ACGACCAGGA GGATACAGAG ATGTTGATTT TGGAATGTTA CAAGGAACAT
CCGCAGCTTC AGTTTCTGGA CAAGTTGCAC TTGGCATATG TAAGAAAATC ACTCCAGAGC
CAATTACCCC ATTACTACAA CCTGTTGGAT GCCAACCATC CATGGATGAT GTACTGGCTT
GCGAATCCGC AACTGCTCAT ACTGGAAGAG CCCTTAACGG CACAAATAGT TGACCTTATA
AACGACAAAA TTTCCAGATG CATCCGTTCT GAAGGTTTGG GAGGAATAGC TGGAGGAGCC
AATCAGATGG GCCATGCTGC CTCAACCTAT GCTGGGGTGT TATCGTTGAT TTTGACTGAA
AACTACGAGC TTTTGGACAA AATCAGGCAC AATCTCTACA AATGGTTCAT AAGCTTGAAA
TTGCCCAACG GCTCTTTTGC AATGCACGTA GGAGGTGAGA GCGATACAAG ATCTACCTAT
TGTGTTTTAT CTGTAGCAGC GATTCTCAAC ATTGTGACTG ACGAACTTGT AGAAAAGACA
GCAGAATGGT TGCTTTCTTG CCAAACATAT GAAGGAGGTT TCGCAGGAGT CCCATATACG
GAAGCCCATG GTGGCTATTC GTTCTGTGCT CTTGCAAGCT TTTTCATTTT GTATAACAAG
AAATCGCAAT TCCAGGAAAA GAGTTCTGTA CATTTGGACG CTTTGATCAA ATGGGCGGTT
CTGAGACAAT ATGGTGTAGA GGGAGGACTC AGTGGAAGAA CTAATAAGTT GGTAGATGCC
TGCTACAGTT TCTGGATCGG AGCGTTGTAT CCAATGCTTG AGTCCGTTAC TGGAGAAGGA
GAACTCTTTT CACGTGAAGC ATTGGGCCAC TACATTCTCC GGTGTGCCCA AGCTGAAGGC
GGTGGATTCA GAGATAAACC AGGCAAGCTG GTGGATTTCT ACCACACAAA CTATACCCTT
TGTGGGTTGA GTCTCTGTGA AACCTTGTTC ACTATCGATG ATGACGACGA AAAGGAAGAC
TCCATACCTT TGGCATTCAA GTTTATGTAT AAAACCATAG ACTCGAACTC ATTCACAGGT
CCAATCAATC CAGTGTATGG CTTGCCATTT GACTTGACAA ACACATGCAG AGACCATTTC
TACAGACTTG ACAACGAAGC TTAACGACAG TACAATTACG ATTCATCGAA TATCAAGATA
AATACATTTA TAATCGTAGT CATTATTTTA ATCATATAAA AGTTACTGAT TG
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| Protein sequence | MAKDKEKVAY IMKLLGRKRG VEVNISHDND SDREINKLDT NPEFSFNPQD SPIKDDYISK
TVDDQEDTEM LILECYKEHP QLQFSDKLHL AYVRKSLQSQ LPHYYNSLDA NHPWMMYWLA
NPQSLISEEP LTAQIVDLIN DKISRCIRSE GLGGIAGGAN QMGHAASTYA GVLSLILTEN
YELLDKIRHN LYKWFISLKL PNGSFAMHVG GESDTRSTYC VLSVAAILNI VTDELVEKTA
EWLLSCQTYE GGFAGVPYTE AHGGYSFCAL ASFFILYNKK SQFQEKSSVH LDALIKWAVS
RQYGVEGGLS GRTNKLVDAC YSFWIGALYP MLESVTGEGE LFSREALGHY ILRCAQAEGG
GFRDKPGKSV DFYHTNYTLC GLSLCETLFT IDDDDEKEDS IPLAFKFMYK TIDSNSFTGP
INPVYGLPFD LTNTCRDHFY RLDNEA
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