| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_77262 |
|---|
| Symbol | PMM1 |
|---|
| ID | 4837955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | + |
|---|
| Start bp | 500900 |
|---|
| End bp | 501740 |
|---|
| Gene Length | 841 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640389270 |
|---|
| Product | phosphomannomutase |
|---|
| Protein accession | XP_001383369 |
|---|
| Protein GI | 126133689 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.181406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CAAATCTCAC TTCACAGACC GCTACCCAGT ATATACACAA AATGTCATTT GCCAGCAAGG
AAAACCCAAA GACTTTGGTG TTGTTTGATG TCGATGGAAC TTTGACTCCA GCCAGATTGT
TCATTTCTGA CGAGATGAAG AGCACTTTGG AAAAGTTGAG AAAGAAGGTT GTTGTTGGCT
TCGTTGGAGG CTCGGACTTG AAGAAGCAAG TTGAACAGTT GGGTCCAAAT GTTTTGCAAG
ACTTTGACTA CTGTTTCTCT GAAAACGGTT TGACTGCTTA CAAGTTAGGT AAGGAATTGG
CTTCGCAGTC TTTCATCACC TGGATCGGCG AAGAGAAGTA CAACAAGTTG GCCAAGTTCA
TCTTGAAGTA CTTGTCTGAG CTCGACCTTC CAATCAGAAG AGGTACCTTC ATTGAATTCA
GAAACGGTAT GATCAATGTC TCCCCTATCG GAAGAAATGC TTCTACCCAA GAAAGAAAAG
ACTACGAAAA GTACGACAAG GAACACAAGA TTAGAGAGAA TTTTGTTACT GCCTTGAAGG
AAAACTTCGC AGACTACGGC TTGACCTACT CCATCGGTGG CGAGATCTCG TTCGATGTCT
TCCCAACCGG TTGGGACAAG ACCTACTGTT TGCAACATGT TGCTGACGAG CACTTCGAAG
AAATCCACTT CTTTGGTGAC AAGTCCTACA AGGGAGGTAA CGATTACGAG ATCTACGAAG
ACAAAAGAAC CATTGGTCAT GCCGTCAACT CCCCAGCTGA CACCATTAGA ATCTTGAACG
ATATCTTTAA ATTGTAAGCT AACCCTAAAT ACCCTAAATT ATAATCAACA TACTCATAGA
C
|
|---|
| Protein sequence | MSFASKENPK TLVLFDVDGT LTPARLFISD EMKSTLEKLR KKVVVGFVGG SDLKKQVEQL
GPNVLQDFDY CFSENGLTAY KLGKELASQS FITWIGEEKY NKLAKFILKY LSELDLPIRR
GTFIEFRNGM INVSPIGRNA STQERKDYEK YDKEHKIREN FVTALKENFA DYGLTYSIGG
EISFDVFPTG WDKTYCLQHV ADEHFEEIHF FGDKSYKGGN DYEIYEDKRT IGHAVNSPAD
TIRILNDIFK L
|
|---|
| |