Gene PICST_77218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_77218 
SymbolPGM2 
ID4838350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp167218 
End bp170068 
Gene Length2851 bp 
Protein Length560 aa 
Translation table12 
GC content45% 
IMG OID640389665 
Productphosphoglucomutase 
Protein accessionXP_001383318 
Protein GI126133587 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0033] Phosphoglucomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0137568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTAAGTAC CTATTTGAAG CCAATTGAGT ATCTCTGCCA TCGCAATTGC CGTTTTTCGT 
ACTCTTCTAG CGTCTCTCTC ACATCTGCCC CTCCATAGAT TTTCCCGCCC ACCCCTCATC
TTTTTCACTC CACTATTTAG ATTGGGCCAA ATCTACACAG AGATTAATTT TCCACATCTT
TCTTTTTCCC GATCCCAGCG TATTGCCTTA CTCCAAACAC AGACAATGTC CGATTTCTCC
GTCCAGACCA TTGCCACCAC GGCCTTCACA GACCAAAAGC CTGGAACCTC TGGTCTCAGA
AAGAAAGTTA CTGTGTTTCA ACAGCCTCAC TACACTGAAA ACTTCATTCA GGCTATTCTC
GATGCCATTC CGGAAGGTGC CCAAGGTGCC ACTCTTGTTG TAGGAGGTGA TGGCCGTTTC
TACAACGACA AGGTCATCAA CTTGATCGCC AAAATCGCCT CGGCCAACGG AGTTTCCAAG
TTGATTTTGG GTCAAGACGG GATTCTTTCC ACTCCAGCAA CTTCGCATGT AATCAGGATC
AGGGGTGCAA CTGGAGGAAT TATTCTCACT GCTTCACACA ACCCCGGAGG CCCCAAAAAC
GATTTGGGTA TTAAGTACAA CTTGGGAAAC GGTGCACCAG CTCCAGAATC GGTTACCAAC
AAGATCTATG ATGTCTCCAA GGAATTGACT TCGTACAAGC TCATTGATTT ACCCGACATT
GATTTGTCCA AAACCCAGAC CGTGCAATTG GGCCCTCTTG AAGTGGAAAT CATTGACTCC
ACCTCTGATT ACGTAGCCAT GTTGAAGGAT ATCTTTGACT TCCCCTTGAT CAAGTCGTTC
CTCGAGACTG CCACTAAGGA GCAGGGATTC AAGGTTTTAT TTGATTCGCT CAATGGTGTC
ACTGGCCCCT ACGGCTACAA GATCTTCGTT GAAGAATTAG GATTGCCTCT TAACTCAATC
CAAAATTACC ACCCATTGCC TGACTTTGGT GGTTTACACC CAGATCCAAA CTTGACCTAT
GCTCATACTT TGGTCGAGAG GGTCGATAAG GAGAATATTG CCTTTGGTGC TGCATCTGAT
GGTGACGGTG ACAGAAACAT GATCTACGGT GCTGGTACCT TTGTTTCGCC TGGTGACTCT
GTAGCCATCA TCTCGGAATA CGCCGATTCC ATCCCTTACT TCAAGAAGCA AGGTGTCTAC
GGTTTGGCCA GATCCATGCC TACCTCTGGA GCCATCGATT TGGTAGCAAA GGCTAAAGGA
TTGAATGTTT ACGAAGTGCC AACCGGTTGG AAGTTCTTCT GCAACCTTTT CGACGCTGAC
AAGTTGAGTA TCTGTGGTGA AGAGTCGTTT GGAACAGGCT CCAACCACAT CAGAGAAAAG
GACGGCCTTT GGGCTGTAGT TGCCTGGTTG AACGTGCTAG CAGATTACAA CGTCAAGAAT
CCAGAATCCA AGACATCTAT TTCTGTAGTG CAGAACTCGT TTTGGAAGAA ATACGGAAGA
ACTTTCTTCA CTAGATATGA CTACGAAAAC GTATCGTCTG AAGGTGCTGC CGAGCTCATC
AACTTGTTGT CTTCTATTGT TGACTCTAAG AAACCAGGAA GTAGCTTAGC TGATGGCTAC
GTCGTCAAGG AAGCTGCTAA CTTCTCGTAC ACCGATTTGG ACGGCTCTGT TTCGTCCAAC
CAAGGTTTGT TCATCAAGTT TGAAAGCGGC TTGAGATTCA TAGTAAGATT GTCTGGTACT
GGATCATCCG GTGCTACAGT CAGATTATAT CTCGAAAAGC ACTCTGCCGA CGAATCCACC
TATGGCTTAG GCGTAGACCA GTACTTAGTT GATGACATCA AGTTTGTCTT GGACTTGTTG
AAGTTCAAGC AGTTCTTGGG AAAGGATGAA CCAGATGTTC GTACCTAGAC CGAGATTTAA
TCTCTAGACT TGCCTAATTC TGACTACTTA GTCGGCTTTG TTCGAGTTTG CCTACTCAGT
TATAGCCTCT TACTTACTCG TTGCGATAAA TACACATACA TTCACAATAT TAAAACAGGT
GGTAACTTTT CAAGTCGGTT ATATTAATAT ACAAGGAAAA TAAATATATA TATATAGAAC
ATTATATCAG CAATTCGTAA CATAAAAATT AGGGAAGCAT TATTTCAACT TAAAATTAAA
CTTTAATTTG AATTTGAATA TCAATCAAAC GTCGATACAA GTCAGATGTC AACATAAATT
ATAACACTAA GACTTTAGCA TCTGTCCTTC GAAAAGCATT CTTGCTTAGT ATCTTGCCTT
TTTTGGGTCG CTGCCGTATT CGTCATCGTT ATCTCTCTTT AAAGAAGGCA ACACGATGCT
ATTAGATGCG GAGGCTGTAG GTTCAGTCAA CGATCTAATA GCAGGCAACA CGGTAGCACT
CTGTTGATGG TGGATAGGCT GTATATCACC AAATCTGTTG ATTCCCGACA GAAGACTAGT
GGCCGGAGGA AGGGTGATAC CAGCGGCTGG CACATGTACA GGAGCCTGTG TTTGCACTGG
AGCAGATGTC TGAGAAATTG GAACTGCAGG TGCTTGTGGT GCCGTAAAGT TGGATTGAGG
TGTTGGTACA GATGAATGTT GATGAGTCGT TGCAGGTACT TCAGAAGTAG TTGCCTGTGG
GGCAGTTGAA GGGGCAGCAG AAGCAGCAAC AGGCTGAGCA GTTTCGGTAG CAGCAGGTGG
AGCGTTTCTC AAGGTTAGCA CTTCGTCCAA TCTCTTTTTC ATAGAGCTTT CTCTGAGTCT
CGCAGCCTGT TCCATAGCTT CTAACTCCAT AATTCTGGTA CGGTACAAAT CGTTCACCAA
CTCCAACTCG GATATTCTTG TTTTCAACAA C
 
Protein sequence
MSDFSVQTIA TTAFTDQKPG TSGLRKKVTV FQQPHYTENF IQAILDAIPE GAQGATLVVG 
GDGRFYNDKV INLIAKIASA NGVSKLILGQ DGILSTPATS HVIRIRGATG GIILTASHNP
GGPKNDLGIK YNLGNGAPAP ESVTNKIYDV SKELTSYKLI DLPDIDLSKT QTVQLGPLEV
EIIDSTSDYV AMLKDIFDFP LIKSFLETAT KEQGFKVLFD SLNGVTGPYG YKIFVEELGL
PLNSIQNYHP LPDFGGLHPD PNLTYAHTLV ERVDKENIAF GAASDGDGDR NMIYGAGTFV
SPGDSVAIIS EYADSIPYFK KQGVYGLARS MPTSGAIDLV AKAKGLNVYE VPTGWKFFCN
LFDADKLSIC GEESFGTGSN HIREKDGLWA VVAWLNVLAD YNVKNPESKT SISVVQNSFW
KKYGRTFFTR YDYENVSSEG AAELINLLSS IVDSKKPGSS LADGYVVKEA ANFSYTDLDG
SVSSNQGLFI KFESGLRFIV RLSGTGSSGA TVRLYLEKHS ADESTYGLGV DQYLVDDIKF
VLDLLKFKQF LGKDEPDVRT