Gene PICST_77124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_77124 
Symbol 
ID4837923 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1633405 
End bp1634333 
Gene Length929 bp 
Protein Length109 aa 
Translation table12 
GC content39% 
IMG OID640389238 
Productpredicted protein 
Protein accessionXP_001383597 
Protein GI126134145 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.675862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AATTATACAA AAAGTACGTT GAAACGGGCC AAAACAGTGT GAAATGAACC AGAAACACAC 
GAGATAATAG ATACCAATGA ATGTAAAAAA GAGACATTTC GAAATGGGTT CAAAGACAGC
CTGAAAATTT ATGATTAGTG GGAATCAGAA TTGAATGTAC TTAAAGATAG AGAATCGTGT
CCAATAAATG TAGAGTTCAA CTATTCACAG ATAGCCTAGA TCGTTAACGA CGATTTTCAA
GTCCATATTC ATTTTGAAAA GATACAACTA TTTCAGGTAG AGTGTCTACT CTATGAATGT
TTTATGAATT TTAATCGAAT ATTGATACAG CACATCCATA AGGTCACAGC ATAGAATCCT
ACGCTATCCG AATTTGCAAG ATTTATTGGT ATCATTGTAG AAGTCGTGAA GGATCTAGAT
AAGCTCAAGC ATGATATCCC AGATTTGTCC TATTATCTAT TATCTATCTT TTTAGATTAC
GAATGCCTAC TAACATCTTT AGTGAAATAC TTAGCTGCTT ACTTATTGTT GGTTAACGCC
GGTAACGCCA CACCATCTGC CGCTGACATC AAGGCTGTCT TGTCTGCCGC CGATGTCGAA
GTCGAAGAAG AAAAGGTTGA AAAGTTGATC GCTGAAGTTG AAGGCAAGAC TGCTGAAGAA
TTGATCGCTG AAGGTAACGA AAAGTTGTCT TCTGTCCCAA CCGGTGCTGC CGCTGGTGCT
TCTGCTGGTG CCGCTTCCTC TGGTGCCGTT GCCGAAGAAG CTGCTGAAGA AGCCGCTGAA
GAAGAAAAGG AAGAATCCGA CGACGACATG GGTTTCGGTT TGTTCGATTA GAGAAACAAT
ATGCTTCTTT TACGTCATTA CATCCTCCTT AATATATATT AGTTTTACGT CCAACGTCAA
ATGATTGTAT AATAATAGAA TACTTCATT
 
Protein sequence
MKYLAAYLLL VNAGNATPSA ADIKAVLSAA DVEVEEEKVE KLIAEVEGKT AEELIAEGNE 
KLSSVPTGAA AGASAGAASS GAVAEEAAEE AAEEEKEESD DDMGFGLFD