| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_76983 |
|---|
| Symbol | |
|---|
| ID | 4838299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | - |
|---|
| Start bp | 1140282 |
|---|
| End bp | 1141309 |
|---|
| Gene Length | 1028 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640389614 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001383849 |
|---|
| Protein GI | 126134649 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CAATTACTTG TTCTTATTCC GAAATTTCGT CGTGAAACTA TCACCATAAT TCTCAACTAG
TCAATAATGA GTAACCAGAA CTGGAAGAAT TTATCCCAGG AATTAAGACG TCGAGCAGCC
CAAGCCAAGT CTACTGGAGG AGGACCTCCC AGATCTCCCT TTGGAATTTT CGCTGGAGTA
GGTGGGTTAT TGTTGTTGGG AGGTGTTTCT CTCGTTGCCC AAAATGCTCT TTTCAATGTC
GACGGTGGTC AGAGAGCCAT TATCTACTCT CGTATTGGTG GAGTGCAACC ACGTATTTAC
CCTGAAGGTA CTCACTTTGT CATACCTTGG TTCCAGAGAC CTATCATCTA CGATGTCCGT
GCCAAACCAA GAAACGTCGC CTCTTTAACC GGCACAAAGG ATTTGCAGAT GGTCAACATC
ACATGCAGAG TGTTGTTCAG ACCTGACATC TTGCAGTTGC CTACAATCTT TAGAACGTTG
GGAACTGATT ATGATGAAAA AGTCTTGCCT TCGATTGTCA ACGAAGTGTT GAAGTCTGTT
GTAGCCCAGT TTAACGCATC GCAATTGATC ACTCAGAGAG AAAAAGTTTC ACGTTTAGTG
AAGGACAACT TGGTTCGTCG TGCTGCCAAG TTCAATATTG ACTTAGACGA TGTTTCTTTA
ACATTCATGA CGTTTTCGCC TGAGTTCAGT GCTGCAGTAG AAGCTAAGCA GATTGCCCAG
CAAGATGCCC AAAGAGCTGC CTTTGTAGTC GACAAGGCCA TCCAGGAAAA ACAGCAATTG
GTCGTCAAGG CCTCTGGTGA AGCTAAATCT GCCGAGTTGA TTGGTGAAGC AATCAAGAAA
TCCAAGGATT ACGTTGAGTT GAAGAGATTG GACACTGCCA GGGAAATTGC CACCATCCTT
GCCAATTCGC CTAACAGAAT CTTGTTGGAT AACGATACTT TGTTGTTGAA TACTGTGACG
GATAGTCGTA AATGAGGTAA ATAAACAGGT TCGAACCATT GTACATAGAA AAATGAACAT
TTCATGAT
|
|---|
| Protein sequence | MSNQNWKNLS QELRRRAAQA KSTGGGPPRS PFGIFAGVGG LLLLGGVSLV AQNALFNVDG
GQRAIIYSRI GGVQPRIYPE GTHFVIPWFQ RPIIYDVRAK PRNVASLTGT KDLQMVNITC
RVLFRPDILQ LPTIFRTLGT DYDEKVLPSI VNEVLKSVVA QFNASQLITQ REKVSRLVKD
NLVRRAAKFN IDLDDVSLTF MTFSPEFSAA VEAKQIAQQD AQRAAFVVDK AIQEKQQLVV
KASGEAKSAE LIGEAIKKSK DYVELKRLDT AREIATILAN SPNRILLDND TLLLNTVTDS
RK
|
|---|
| |