| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_76943 |
|---|
| Symbol | CTI6 |
|---|
| ID | 4837971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | + |
|---|
| Start bp | 699351 |
|---|
| End bp | 700775 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640389286 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_001383418 |
|---|
| Protein GI | 150864556 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.100507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TACACGCGTC ATGCCTCGTC GTTCAGGAAG ATCCAGATAT GCGGACCAGT CGGAGCCGAC
TTCAGAGTTT GCAGCAGAAG ACGAGATAAA CAACTACGAA GCAGAAGCAG AAGATGAAAT
CGATGATGAG GAACAGGAAG TCACTCGTTG TGTTTGTGAA CAAGACGAAT TGAACACAGC
ATTGGTGAAT CCGCAACTAT CAGAGGTTCT AATCAAGGAA TATTCAATCA AAATCGACCA
GGGACTTTTC ATCCAGTGTG ACAAATGTTC AGTATGGCAG CATGGGTATT GTGTAGGGCT
CTTCACCAAC GATGAAGTTC CAGACAAGTA CTGGTGTGAA TTGTGCAAAC CTGATCTCCA
CGTGTTTATA TATGATAATG GAGAAGCCGT GAGGACACTT TACCGTCCTG TCAACGAAAA
GAGACGTAAG TTACTGTTGG AAAGTCTCGC TGCTGGCCAG TCCATCCAAC AAAAGACAAG
TTCCAGACTG CGAACCAAAC GACTGGCACT GGCCAATTCG AATTCTAATG ATAATAGCAG
AGAAAGAGAA AAAGAATCAG GGAATAACGG AAAATCTCGT AAAGAGAGAA GACATTATGA
TGAATCATAT GATGAACAAC TTCAAAAGGC TTTAAGAGAA AGTGCAAAGG AATCAGGATT
ACCATTAGAC TCTGAGACTT CATCGAGAAG AAGCAACAAC AATAGCAACA ACAACAATAG
TAATAATAAT AATAGTAATG GCAACGATTC TTCGAGTGTC TCATCGTCTG GATCGATTTC
TTTACGGAGA AGAGCCAAAT CTGAAGATTC TGACGATGCC AAACGCACCA AGCTTGAAGT
TCCGGAAGTT GCTGATTCAG ATACTGGAGA GCATGAAGCT TCGAACATTG AAGAAGATAA
CGAAGATGAA TCCAAGCCAA AGTACGACAC AAGAAGGACG AAACCCAAAA GTAGATCAAC
CAAACCCAAA AAGAAAGGTT CTCATAACGG AGCCAATAGT TCCAAGTCTG CATCGAATGA
CGAAGCCAGT AATGGTAATC TGGCTTTTTC CAAGGAGGAA CTCGTCAACC AACCTTCAAA
GCCACGTTAT GTCAGCGATA AATCGTCCAT ATACGAATTG CGTAAACGCA CCGGCGCTAT
TCTTGAATGG CTTGGTAGAT CACAACTCGA GCTCGAGGAT GAAAAAGTCA ACAAAATCCA
ACTCTTCACA TTCAAGGAAA AGACCGAAAG CGACCAAAAT GTGATAGACG AAGACGGCAA
CAAGGTCATT GTGAAGTTTG ATGAGAACTT GAAACTAATG GAATCCTTGA CAGAGAAGAT
CCTTGCCTGG GAACAGAAGT TCGGCAAGTA CGCTCCATGA ATGTACAACC CTACGCATAT
ACTTTTCTAA TATATTGTTA TAATATCATG AAAACATTAT CTTCT
|
|---|
| Protein sequence | MPRRSGRSRY ADQSEPTSEF AAEDEINNYE AEAEDEIDDE EQEVTRCVCE QDELNTALVN
PQLSEVLIKE YSIKIDQGLF IQCDKCSVWQ HGYCVGLFTN DEVPDKYWCE LCKPDLHVFI
YDNGEAVRTL YRPVNEKRRK LSLESLAAGQ SIQQKTSSRS RTKRSASANS NSNDNSRERE
KESGNNGKSR KERRHYDESY DEQLQKALRE SAKESGLPLD SETSSRRSNN NSNNNNSNNN
NIADSDTGEH EASNIEEDNE DESKPKYDTR RTKPKTNSSK SASNDEASNG NSAFSKEELV
NQPSKPRYVS DKSSIYELRK RTGAILEWLG RSQLELEDEK VNKIQLFTFK EKTESDQNVI
DEDGNKVIVK FDENLKLMES LTEKILAWEQ KFGKYAP
|
|---|
| |