| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_76889 |
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| Symbol | PBP2 |
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| ID | 4837841 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 652463 |
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| End bp | 654310 |
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| Gene Length | 1848 bp |
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| Protein Length | 500 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389156 |
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| Product | PAB1 binding protein |
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| Protein accession | XP_001383407 |
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| Protein GI | 150864547 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0374206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGCGAGTATG TCGTCAAATA GCAATATCTT GAAACGTAAG AACGACGATC TCGAGTCATC
CGCTGGAGAT CAACTTAACA AACGTGTAGC CCTTGATTCT GAACAGTTGG ATCTCAATGT
GATTCAACAA GAACAATCAC AAACTGCTCC AGCCATTGGC TCCTCTGTTA CTGGAGAGGT
TGTTGAGCCC GTAGAAGTTT CCGCAGAAGC AATTCACGAA GCCTCGGCCG AAAAGACCGA
GACTGTGGCC AACTTGGAGG ACGAAGATCA GAACGTCGAA GATGATTATG ACCCATCTAT
CGATATCAAT GTATCTAACA ACAACATCAA TGACAATAAT AACAATATCA ACAATGATGT
CAATACTATC ACTAATACTA ATATTAGTAA TATCAATGCT GGAAGCGATG CCGTAAATGA
CATCGATGAC GTTTCTTCGA ACTATACCAA CTACCAACAC GACTCCTACG GAGGTAGTGA
ACATGCTAGT GGTTCAAAAC CTATCTCCAA TCATCGGGAA CGGGATAGTG ACCCGACTTA
TGTGCTGATC CGAATGTACT GTCCGGTTAA GGAGGCCAGC TGTATTGTGG GGAAGAAAGG
TGAGAAAATC AACCATATAC GTGAAAAAGC AAGTGTACGC ATCAATGTCA GTGAGAACTT
GAAGAATGTG CCTGAACGTA TAATTTCTGT CCGTGGACCA GCGGAGAACG TAGCTAGGGC
ATTTGGACTC ATCACAAGAA CAATTTTGGA TGAACCTGAA GATGAACCTG CTTCCATGAT
CAGTCAGCAG TACAACTTGA AGATTTTGGT GCCTCACCCT ATGATTGGCT TCATCATTGG
AAAACAGGGC CTGAAGTTTC GCGAGATTGA AGAAAACTCA GCAGCCAAAC TAAAGGCAGC
AGAGCAACCT TTGCCGTATT CTACAGATAG AATTTTGTCC ATAACTGGAG TGGGAGATGC
TATCCATATA GCCATCTATT ACATTTCCCA GGTAATGCTT GAGCACAAAG ATTGTTTGAA
GAAGAACAAA ATCATCTACT ACAACCCTGC CAACTTCCAC CACTCCAACG TCTCTAATAG
CATGATGAAC ATCTCAATGG TTTCCAACAA TAACAATATG AACAATATGA TGGTTATGGG
TCCAAATGCG ATGTCTCTTC CAATGAAAGA TAACAATATG GCCAATCCGT ATGGACAGAA
GCCACAACCA TATGGCCAGC ACCAAAATAA ACCTCCACAG CAACATCAGC ATCAACAGCA
ACAACAGCCT TACAATTTCC AGATGATGTT CCAACCAGCT ATACATCCAC AACATCACTA
CGGAGCCATG GCTCCAGCAG CAGCTCCACC ACCTCCAATT CAGATGCCAT CACAGACTCC
ATACACTGAC GAGCACGGTA ACACAATTAT CGGCGAAGTC ATCACTAATC CTCCAGTTCA
ATCAGGACCT ACTCCTGATA AGTTGAACCA AGACGTTTTC GTAGCCAACG CCAACATAGG
ATCCGTCATT GGAAGAAGAG GTAATAATAT CAAACACATC AGAGAAAACA GCGGATGCAC
ATATGTCAAA ATTGAACCAG ACAAGGGCCA ATCCATCATG TTGGGAGGCG GCAAAGGCTT
AACCAACATC CGAAAATTGA CGTTGACAGG AACCCTCAGC TCTATCCAGA CTGCCATCTT
CTTGATCAAC CAGAGAATCG CAGCCGACAA GGAAAGAAAT GCTCTTCATT GACTTGTACA
CTTTTGATAA CTCTCATATT CAATGTCTGT GGACCATCTA TAGTCTTCTT TCTTTCTTTG
TTCTTTTTAT CACTTTCATT TTCTAATATA TCTTATCTGA TCATCTGT
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| Protein sequence | MSSNSNILKR KNDDLESSAG DQLNKRVALD SEQLDLNVIQ QEQSQTAPAI GSSVTGEVVE
PVEVSAEAIH EASAEKTETR CRSEHASGSK PISNHRERDS DPTYVSIRMY CPVKEASCIV
GKKGEKINHI REKASVRINV SENLKNVPER IISVRGPAEN VARAFGLITR TILDEPEDEP
ASMISQQYNL KILVPHPMIG FIIGKQGSKF REIEENSAAK LKAAEQPLPY STDRILSITG
VGDAIHIAIY YISQVMLEHK DCLKKNKIIY YNPANFHHSN VSNSMMNISM VSNNNNMNNM
MVMGPNAMSL PMKDNNMANP YGQKPQPYGQ HQNKPPQQHQ HQQQQQPYNF QMMFQPAIHP
QHHYGAMAPA AAPPPPIQMP SQTPYTDEHG NTIIGEVITN PPVQSGPTPD KLNQDVFVAN
ANIGSVIGRR GNNIKHIREN SGCTYVKIEP DKGQSIMLGG GKGLTNIRKL TLTGTLSSIQ
TAIFLINQRI AADKERNALH
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