| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_76723 |
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| Symbol | |
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| ID | 4838068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 1508650 |
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| End bp | 1511203 |
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| Gene Length | 2554 bp |
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| Protein Length | 816 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389383 |
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| Product | predicted protein |
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| Protein accession | XP_001383907 |
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| Protein GI | 150864902 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5047] Vesicle coat complex COPII, subunit SEC23 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.322437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TATAGCCAAA GAGTCTATTG CCGTATAGTA CACTGTATGG GTTCAATCGT CTCCTGATCC
TTCAATCACA ATGGACTTTG AAACCAGGGA AGAAATAGAC GGAGTTCGTC TCTCATTCAG
CTGTATTCCC AAGCTGAGAC TCCAGCACCA GCGCAATGTC GTGCCCTTGG GAGCCATGTA
TACTCCGCTC AACAACAAGT CCAACATCCA GGTGTTACCC AAAGAGGAAA TGCTAGCCTG
TCGCCAATGT CGGGCTATAG CCAACCCGTT TGTCACAGTC AACAATGAAA TATGGACTTG
TCCTTTCTGT GGCTTCACCA ATAGACTAGT CTTGAACCAG ATCGATCCGG ACACCAACAA
CTACGTCCTT CCTCCGGCCT TACACGAGAC AAGCTCCACT GTGGAATACC AGACAGGAAG
GCTTAGTTCT TTGCCACCAA TCTTCTTCTA TGTCGTAGAT ACATGTTTTG TTGCGGATGA
TGTTGAGGAG TTCCAGTCAC TCAAGGAGTC GTTGATCATT TCGCTCAGTC TTCTCCCCGA
AAATGCATTG GTGGGTTTGA TCACTTTCGG CAAACATGTA CAGATCCACG ACTTGCTTTC
CAACGATAAC CGAGCCTATA CATTCAACGG CTCGAAGGAG TACACCTTGG ACCAGCTTCT
GAAGAGTCTA GGCTTGCTCG CGCCTGGACT TAATATCCAT CACAGCAGAC AGGCCCACGG
CTCGGGCGTA GACGACATCC TTGGTACTAT TGGCCGAAAG TTCTTACAAC CAGTCAACAT
TGTAGAGTAC CAGTTGACGA ACATAATCGA GAACTTGGCT ACTAATACAT TCCCCCATTC
CAAGTTCAAA GAAAGACCAG AGAGAGCTAC CGGCGCTGCA TTGAATACAG CTTCTCTTTT
GCTCAATGCC TTGCTAGGAG ATCATATCAA AACTACTGGG GGGCATCTTC TCTGTTTTAT
TGGCGGTGCC TGTACTTCTG GATATGGAAA GATTGTAGAT AATCTCTTGA AAGAGCCAAT
GAGATCACAC CATGATATCG AGAAGGCCCA GCAGTCAACT TTGCCCTCTG CACCTACCAC
ATCGACCAAA ACCAAGGTGG ACACGTCTTT ATTCAAGTCG GCTAGAACTT TCTACAAGAA
AATCACCCTG AACTTGGTGT CCATGGGTTT GAGCTGTAAC TTCTTTATTG GAAGTTATGA
CCAAGTTGGT CTCTACGAAA TGGACGAGAT CTGCTACAAG ACTGGAGGTG TAGTAGTCAT
GAGTGACTCC TTCAGTACAG CTATATTCAA GCAGAGTTTT ATTAAGTTCT TCAAGAAACA
GGATGAAGAC AACTCAGAGT ATTTGGATAT GGGTTTCAAT GCCACCTTGG AAGTGAGAGC
TACCTCCGAC CTCAAGGTTG AAGGTCTCAT TGGTAATGCC ACAGCTTTAC CAGTTAGAAA
GGATAATCCT TTTGCAGAGA AAACTGTGTC CCAAACTGTC CTTGGGGAAG GGTCTACCAA
CTCCTGGAAG CTCTGTAATG TGAACCCTCA ATCTACTTAT GCATTGTACT TTGAGAAATT
GGACTCAGGT TTCACCAGTT TTGCATTTGT CCAATTTCTC TTTCACTATC AACATGCATC
GGGTGAAATG AGATTGAGAG TAACCACAGT TCCGCTTTCA ATTATCCCGG ATTCTGATAT
TGTGAATTTG GAACGTGGTT TTGATCAGGA AGCAGCCCTT GTCTTGCTCG CAAGAGATGC
CATTAATAAG ATGCAGCCAG ACAATACCAA TGCAAAGAAT AAACCAATCA TCACTCAGTT
AGCTGTGGTC AAGAACTTGG ACAAGAACTT GGTGGATTTC TGTACTAGGT TCTCTGTTTT
TACACCGGGA ATCTTGGAGT CGTTCAGACT TTCGTCCTCA TACGCTTTGT TACCTCAGTT
CTTGTATCAT TTGAGGAGAT CTCCATTCAT AAATGTGTTC AACAACTCTC CGGATGAAAC
AAGTTTTGTC AGACATGTGT TTATGCATGA AGATGTCAAT AACTCGTTGA TCATGATCCA
ACCGACTCTT TTGTCATATG ATATAGATAC TTTTGGAGCT GTTGATGAAA CTACGGGTTT
AGTCATTACG GAGCCAGAGC CCGTATTGTT GGATTCGTTG TCGTTGGGGC ATTCCAAGAT
CCTATTGTTG GATACCTTCT TCCATATCCT TATTCACCAC GGTAAAAAGG TTGCTGAATG
GAGAAAGGCT GGATATCATG AACAGCCGGA GTACGTTCAT TTCAAGGAGT TCTTGGAGGC
TCCAAAGAAG GAGGCTATGG AAATCTTGAT GGATAGATTC CCGCTTCCAC GTTTTATTGA
TTGCGACGAA GGTGGATCTC AAGCCAGATT CCTTATGGCC AAGTTAAATC CATCTACTAG
TTATGCCACT AATCCTAACC ATCTCTTTGG GTTTGGAGAC AGATTTGATG TTTTCACAGA
CGATACCAGT TTGCAGCTGT TTATGGAACA TATACAACGA ATAGTTACAG CTCAGAAATA
ATCTTTTCGC TTATTGCATG TCATTATATT GTAC
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| Protein sequence | MDFETREEID GVRLSFSCIP KSRLQHQRNV VPLGAMYTPL NNKSNIQVLP KEEMLACRQC
RAIANPFVTV NNEIWTCPFC GFTNRLVLNQ IDPDTNNYVL PPALHETSST VEYQTGRLSS
LPPIFFYVVD TCFVADDVEE FQSLKESLII SLSLLPENAL VGLITFGKHV QIHDLLSNDN
RAYTFNGSKE YTLDQLSKSL GLLAPGLNIH HSRQAHGSGV DDILGTIGRK FLQPVNIVEY
QLTNIIENLA TNTFPHSKFK ERPERATGAA LNTASLLLNA LLGDHIKTTG GHLLCFIGGA
CTSGYGKIVD NLLKEPMRSH HDIEKAQQST LPSAPTTSTK TKVDTSLFKS ARTFYKKITS
NLVSMGLSCN FFIGSYDQVG LYEMDEICYK TGGVVVMSDS FSTAIFKQSF IKFFKKQDED
NSEYLDMGFN ATLEVRATSD LKVEGLIGNA TALPVRKDNP FAEKTVSQTV LGEGSTNSWK
LCNVNPQSTY ALYFEKLDSG FTSFAFVQFL FHYQHASGEM RLRVTTVPLS IIPDSDIVNL
ERGFDQEAAL VLLARDAINK MQPDNTNAKN KPIITQLAVV KNLDKNLVDF CTRFSVFTPG
ILESFRLSSS YALLPQFLYH LRRSPFINVF NNSPDETSFV RHVFMHEDVN NSLIMIQPTL
LSYDIDTFGA VDETTGLVIT EPEPVLLDSL SLGHSKILLL DTFFHILIHH GKKVAEWRKA
GYHEQPEYVH FKEFLEAPKK EAMEILMDRF PLPRFIDCDE GGSQARFLMA KLNPSTSYAT
NPNHLFGFGD RFDVFTDDTS LQSFMEHIQR IVTAQK
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