Gene PICST_71487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_71487 
SymbolFRS2 
ID4838058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp521396 
End bp522918 
Gene Length1523 bp 
Protein Length496 aa 
Translation table12 
GC content44% 
IMG OID640389373 
ProductPhenylalanyl-tRNA synthetase, beta subunit, cytoplasmic 
Protein accessionXP_001383736 
Protein GI126134423 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGCAAATGTC CGATATCCAA TTGCAGTTGT TGAAGCTCGT GCACGAGTCA GGCGAAATCG 
CCAACACGTT GCAAGAAAAG ACTCTTTCAC AGTATGATTC CAACACTTTA CATTCCAATT
TGACCTCATT GTGGTCCAAG GAAATGATCA CTTTCAACAA GATCGAGGTC GATTCGTGGG
CTCTCACAGC CGAAGCCGAG TCGTATGTCA GTGCCGGTGC CACTCCGGAA GTGCAAGTTG
TAGACGAAGT ATTGAAGGCC TTGGAAGGGT TGACTATTTC TGGCTTGAAA GAGAAGTTAG
GCCCTATTGG TTTAGTTGGC CAGGGTAAAG CTTTCAAAAA CAAGTGGTTG AGTAAGGATG
GCGAAAAGTT GATAGCCAAG GTATCTACAT TGCCAGAAGA TGTAGTTTTG AAGGAATTGC
AGACAATTAA AGCTACCGGA TCGTTGGACG ATAAGAAGGA GTTGAATGAG TTGAAGAAGA
GAAAGTTGAT TAGCATGACC AAAATCATCA GTTTCAAGGT AGAAAAGGGT CCCAAGTTCG
CTTTGACTAT CGCCAATTAC GAAACAGACA TTACGTCCGA AATGATCATC AACAGCTCAT
GGAAAGAAGC CGAATTTAAG CCATACAACT TCAACTCGGA AGGTGTGTAT CCTACTTCCG
GAGCCTTACA TCCATTGAAC AAAGTCAGGG AAGAGTTCAG ACAGATTTTC TTCTCTATGG
GATTCACGGA AATGCCCTCT AACCAATACG TAGAAACCGG ATTCTGGAAC TTCGACACTC
TCTTTGTGCC ACAACAGCAT CCAGCCAGAG ACTTGCAAGA CACTTTCTAT TTGAAAGACC
CAGCAGTAGC CAAGCCTCCT CAGGACAAAC AGTATTGGGA AAACATCAAG GCTGTACACC
AGGACGGTAA GTTCGGCTCT ATCGGTTACA GATACCCTTG GAAGGCTGAA GAGTCGTTGA
GAATGGTTTT AAGAACCCAC ACCACTGCCA TTTCTTCTGC CATGTTGCAC AAGTTGGCTG
AAGATCCAAA ACCCGTAAGA CTCTTTTCCA TCGATCGTGT TTTCCGTAAC GAAGCCGTAG
ATGCCACACA CTTGGCTGAG TTCCATCAGA TTGAAGGTGT ATTGGCCGGT TACGACATCA
CGTTGGGAGA CTTGATTGGT TTCATGGAAG ACTTCTTTGG AAAGATGGGT GTTCATGGTT
TGAGATTCAA GTCAGCCTAT AACCCATACA CCGAGCCATC TTTGGAAATT TTTGCATTCC
ACAAAGGCTT GAACAAGTGG GTTGAAATCG GTAATTCCGG TATGTTCAGA CCAGAGATGT
TGGAGTCCAT GGGCTTGCCC AAGAACTTGA GAGTGCTTGG CTGGGGTCTT TCATTGGAAA
GACCTACTAT GATCAAGTAC GGTGTGTCTA ACATTAGAGA ATTGTTGGGC CACAAGGTTT
TATTGGACTT TATTGAGTCC AATCCTGCTG CCAGATTTGA TGAAGACTTA GTCTAGATAG
AGGATAATAA ATTACTTAAT GAG
 
Protein sequence
MSDIQLQLLK LVHESGEIAN TLQEKTLSQY DSNTLHSNLT SLWSKEMITF NKIEVDSWAL 
TAEAESYVSA GATPEVQVVD EVLKALEGLT ISGLKEKLGP IGLVGQGKAF KNKWLSKDGE
KLIAKVSTLP EDVVLKELQT IKATGSLDDK KELNELKKRK LISMTKIISF KVEKGPKFAL
TIANYETDIT SEMIINSSWK EAEFKPYNFN SEGVYPTSGA LHPLNKVREE FRQIFFSMGF
TEMPSNQYVE TGFWNFDTLF VPQQHPARDL QDTFYLKDPA VAKPPQDKQY WENIKAVHQD
GKFGSIGYRY PWKAEESLRM VLRTHTTAIS SAMLHKLAED PKPVRLFSID RVFRNEAVDA
THLAEFHQIE GVLAGYDITL GDLIGFMEDF FGKMGVHGLR FKSAYNPYTE PSLEIFAFHK
GLNKWVEIGN SGMFRPEMLE SMGLPKNLRV LGWGLSLERP TMIKYGVSNI RELLGHKVLL
DFIESNPAAR FDEDLV