| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_71370 |
|---|
| Symbol | |
|---|
| ID | 4838344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | + |
|---|
| Start bp | 1357411 |
|---|
| End bp | 1358303 |
|---|
| Gene Length | 893 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640389659 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001383552 |
|---|
| Protein GI | 126134055 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.598591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0514301 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATATAATCAA AATGGCTCCA ATTGTATGTA TGACATAGTC TAAGAAATCA CACTGAGATA
AAACGAATCT GCAAACCCGC TTGGATTGCT GTATTCCAGA TATAGGAACT ATAGTTTTTT
GGACCTCTTA TGGCATCATA GGATATTGAA ATTGTGTATT CGTAATACGT TATTCATTAT
CTACACTATG ATTCTGTTCA AGACGGTCTT TTTTTTTAAA AGAAGCAACA AGATACTTGT
AATGAGACCT TTTAGATATA CTCTGGGAGG GCTATGCTGT CTTTTTATCT TCTACACCTT
TAAGTGTGTA TCGTGATAAA TATGTGCGGT AGGCTAACAT TAATATAGAC CACTAAGAAG
TCCAAGGCTG CTAAGAAGTT CGTCGTTGAC GTTTCCGCTC CAGTTGAAAA CGGTGTTTTC
GACCAAGAAG GTTACGTTAA GTACTTGATT GAACACATCA AGGTCGAAGG TATTGTCGGT
AACTTGGGTG ACGAAATCTC TGTCTCTGCT GAAGGTACCA AGGTCGTTGT TGTTTCCAAC
ACCAAGTTCT CCGGTAAGTA CTTGAAGTAC TTGACCAAGA GATACTTGAA GAAGAACCAA
ATCAGAGACT GGATTAGATT CGTTGCTGTC AAGCAAAACC AATACACCTT GCAATTCTAC
TCTGTCGCTG AAGACGAAGA AGAAGAAGAC GAAGAATAAG CGCATCACCC ATTTGACTTA
TAGACACAGT CTAACTGTGG TTTTCAAAAT TGTTTATCGT TCACTTTTCC TCTTTTTTGG
CATTCATTTC AATCATATTT TTGTTTCCTG GGGTTTATAA TGTTTAATAG GTTCTTATCT
ATGTATCTAT CAAAATAATA AGTTTTCTTT GATAAGCAGA ATAAACACAA TTC
|
|---|
| Protein sequence | MAPITTKKSK AAKKFVVDVS APVENGVFDQ EGYVKYLIEH IKVEGIVGNL GDEISVSAEG
TKVVVVSNTK FSGKYLKYLT KRYLKKNQIR DWIRFVAVKQ NQYTLQFYSV AEDEEEEDEE
|
|---|
| |