Gene PICST_67308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_67308 
SymbolPIB2 
ID4837730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp850510 
End bp853475 
Gene Length2966 bp 
Protein Length836 aa 
Translation table12 
GC content43% 
IMG OID640389045 
ProductZn finger protein 
Protein accessionXP_001383445 
Protein GI150864573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.106701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGCAGCAGTC ACACAGAGTC GTCCCTCTGT TTCAGAAACT TTGTGGCTTG AGAGATTAGC 
TCATCGTCTA CTGACTCACC CGAACATCTA TAAGTTCAAT CGCTAGAATA CATATACTGG
TTGTTTCACC AGGCATCTCC ATCAGTTAGC AATTAAACCA TAAGAAATTA TACAATAAAG
TTTCTACAAT TCAAACCATC AACATATCCA ACATCTAAGT CCTTCAACAT TCAATATTTA
CTTCTTCAAT ATAAAGTTTC TGGGTAATTG CTTCATATTT TACATCTATA CTCATTATAC
AACATCTGAC TCTTCCTATC ATGTCCACCC CTCCGAGCAA ACAGCCGAAG TTCACTCTAG
CGTCTCCCGA GAAAGACTCT AGCGACGACG AGCCAAGAGA AAACATAGCT ACTGTATTAG
ACGAAACCAA TACAAATCTT TCCAATCTTT CCAACCCAAA TGCCAATACG AATCCGGATC
CTACTAATAA CAATGCTATC AACGGCATCC CTAATGTTAA TTCTAATACA AATGGCAATA
TCACTGCTAC CAACAACTCT CCTATCAACA TTATCACTGA CAACAATAAC GTAAACTCAG
ACTCGGTAGA GTCTCCAGCT GACGACGAAA ACGGAAACGA AAACAAGCTC GACGGTTCTG
ATTTGTCGTT CACCAAGAAA GATCCCCGGA AGTCACGTAC TCAGTCATTT CAGTCAGTGC
TATCCACAGC TTCGTTAAAG TCATTGAAAC AACAGGCCCT AGCAAGTGTT CCCACAAATA
ACAACGTCAA TATTGGCACT CGCAGCAGTA GTATTTCTCA CAACAATCTC AATAATCTCC
ATAGCAACAG CAGTAATTCT AATCCCAATA TCAATGCTAC TGCTAGTCGC AACTTTCAGT
CGTTCATCCA GGCTCCAGTT TTGTCTAGCA TCACGAATCT CAAGATGGAA GACGATATCG
AGATCGGCCA GCAGTTGCCG TTTACTGAGT CAAAAGTGAC TTCTCAGCGC AGTCGTGATC
GTGCTACGTC CTCCACAACT ACAGCTGCAA CTACAAATGC TGTTTCTTTA ACAAATACTA
ATGCCACTTC TACTGTTCAG TCAAAATCTG CACTGGATCA TGATGAAGAA TATGAAGACA
CGATTGTGCA ACAACAGAAG CTCACCTTGA ACGCTTTGAA GAAGCTCTCG TTGTCTCCTA
TGCCTATAAA TACGGCTGAC AATAGTCTTA CAAGAAGACC ACTCAACAGA GCCAGTTCTA
AGCCCAAGAT TGACATAGCT GAATCCAGCA AGGAATCAAT AAACTCTTCA ACATCTGCTC
CAGGAAGCAA GACACGAACT CAAGAGCCTT ACCAGCCAGC AGAAGTAGAC TTGTCATCTT
TTGCTAGTCT TACAAGACAA CCCAAAGTAG CGACGGAGAA GTTGCCTTCT CCAGGTGTTG
CTTCCGCGTC GACTTCGGCA GTGACTGGGT TTGGTGAACG GGATTCTTCA ATCTTCAACC
CTAATACTAG TACGACTTCA AATCCTGATT CGATCCCAAC TGGTACACCC AGCTTGTCTC
AAAAGAGGTC ATTGCCTAGT TTACCAGAAG GAGAGCAGTT TGTAGAAAAT GTAGCAACTG
AGTCAAATGC TGCTGTACGC AGCAATTCTG GTGATGTCAA TCAAACGTAC CAGCATCATC
CACAAGCTCA CCAAGGTTCT CAGCAACAAT ACCAACATTC AAAGCAAGAC AGCCACCATA
TGCAGCTTGG TAATAGGATC CCTTCTGCTG TAGTACCTCC CCAGAACATG AACACTAGAC
GAGTTCCTCT GGGAGGATTC CAAGCGCCCA ATGTATACAA TTCTCATATG GCATCACAAA
CACAACAGAA TCCACATCTT CATTACCCCA AGGCTAACAG GCAGTTGCAG CAGATTAAGG
GATTCCGAAG TCCAATGTAT GTTCCAGCCG TGTTGCGGAT GTCTACTTTG AGTACTGTAT
CACCTACTAA TTCAAATACG TCTGGATCTA ATCCCAACTC GCCTAACGAG TTGTCTACTT
CTCCAAAGAA TGGTACACAC TACGAACACG ACCATTTGAA CTTGAACGAA CCTGCTGCTA
CACCTAGATC GTCCAGTAGA GCCTCTGTAA AGTCGTTTGA TTCTGGAATC TCTGTAGAAT
CGTCGAGCTC CACAACTAAC CAGCCAGGTT CGTCGCCTTT CCTCAGCTTG TTGGGCAAGA
ATGGAAATCC CGAGTCATAC ATTTTCCGCG CTCCGCCTAC CAGAAAGCAT TGGGTTAAAG
ATGAGGCCGT GTTAAAGTGT GGTATGCCCT TCTGTTCCAA AGTGTTCAAC TTCTTTGAAA
GAAGACACCA TTGTCGGAAG TGTGGAGGGA TTTACTGTAA GGAGCATACG TCGCATTATC
TCTATATCAA TCACTTGGCA CAGTTTACCA CGGGAGGCAG AGGTACTTTG TCTAAGGTGT
GCGATTTGTG TATTGAAGAG TATAATGACT TCATACAGCA CGAGTTTGGA GTCAACATTG
CACATTCGTC GTCGGAGAAC TCGTCTTACC ATTCTGCTGA ACACATTGCT CGTACTGCTA
ATAGTAATAC TATTAGTAAT ACTGTTGCTA AGGGTAGTAG TGTTGGTGTT GGTGTTGGTT
CAGCAGTAGA CACAGTTGGA CCCAGAAAGG ATACTAGATC GTCACAGACA CCCAATCCAC
AGTATTTGCG GAATGGTATT AACCCAGGCA AGTCTCATTT GATTGGAGTC AATGCCAATG
ACGAAACGAA CCAAAGAAGC GAACAAGCTG TAGGCAGTGT GCCTGCCAAC TGGAGTTGGA
GTTCGTTCTG AGCTTAACTA CATCATTTAT TTAATTCATA CTGCAGAAGG ATCTGCCACG
GAGAGCTTGA TATGACTCCA ATAATATGCA TTTTGATACT GAATAGAGGC GTTGTCATTT
TATACTTGGT TTTATGAAGT TTTTCT
 
Protein sequence
MSTPPSKQPK FTLASPEKDS SDDEPRENIA TVLDETNTNL SNLSNPNANT NPDPTNNNAI 
NGIPNVNSNT NGNITATNNS PINIITDNNN VNSDSVESPA DDENGNENKL DGSDLSFTKK
DPRKSRTQSF QSVLSTASLK SLKQQALASV PTNNNVNIGT RSSSISHNNL NNLHSNSSNS
NPNINATASR NFQSFIQAPV LSSITNLKME DDIEIGQQLP FTESKVTSQR SRDRATSSTT
TAATTNAVSL TNTNATSTVQ SKSASDHDEE YEDTIVQQQK LTLNALKKLS LSPMPINTAD
NSLTRRPLNR ASSKPKIDIA ESSKESINSS TSAPGSKTRT QEPYQPAEVD LSSFASLTRQ
PKVATEKLPS PGVASASTSA VTGFGERDSS IFNPNTSTTS NPDSIPTGTP SLSQKRSLPS
LPEGEQFVEN VATESNAAVR SNSGDVNQTY QHHPQAHQGS QQQYQHSKQD SHHMQLGNRI
PSAVVPPQNM NTRRVPSGGF QAPNVYNSHM ASQTQQNPHL HYPKANRQLQ QIKGFRSPMY
VPAVLRMSTL STVSPTNSNT SGSNPNSPNE LSTSPKNGTH YEHDHLNLNE PAATPRSSSR
ASVKSFDSGI SVESSSSTTN QPGSSPFLSL LGKNGNPESY IFRAPPTRKH WVKDEAVLKC
GMPFCSKVFN FFERRHHCRK CGGIYCKEHT SHYLYINHLA QFTTGGRGTL SKVCDLCIEE
YNDFIQHEFG VNIAHSSSEN SSYHSAEHIA RTANSNTISN TVAKGSSVGV GVGSAVDTVG
PRKDTRSSQT PNPQYLRNGI NPGKSHLIGV NANDETNQRS EQAVGSVPAN WSWSSF