Gene PICST_65460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_65460 
Symbol 
ID4838196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1201537 
End bp1202535 
Gene Length999 bp 
Protein Length289 aa 
Translation table12 
GC content43% 
IMG OID640389511 
Productpredicted protein 
Protein accessionXP_001383857 
Protein GI150864862 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0573026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTCAGAAACT CCAATTTGCC GATAGATTCC ACAAGAATGA GCTTTACCAC CACCGCTGAA 
ATCGCCCAAT TTGGCGGAAA ATTATACAAA TTGTCGCACA ATTCTGTTAC TACCAAGACT
AAGATGGATG TGAATGTCTT CGTACCCTCG AAGAAAGATG AATCGACAAA GCTTCCTGTG
TTGCTCTATT TGTCTGGACT CACATGTACG CCCAACAATG CAAGCGAAAA GTCCTTTTTT
CAGTATTTTG CAGCTAAATA CGGTTTTGCC ATAGTATTCC CAGACACTTC ACCTCGTGGA
GCCAACATCG CCGGAGAAGA TGATTCGTGG GATTTCGGTA CGGGTGCCGG TTTCTATGTT
GACGCCACTA CTGATCCTTG GAAAAACAAC TACAAAATGT ACTCGTATGT CCACGAGGAA
TTGCAATCTG AATTGGCGTC ACAATTCCCT GATTTAGACT TTTCTAGAAT CTCCATTACT
GGCCATTCTA TGGGAGGATT TGGTGCGTTA TCGGGATTTT TGAAGAATCC CGGAAAGTAC
CAATCAGTCA GTGCCTTTTC CCCTATTTCT AACCCACTGA CTTGTCCTTG GGGAGAAAAA
AACTTTGGAA ACTACTTGGG CCCAGACAAG GAAGCCTGGT ACAAATACGA TCCTACTCAC
TTGATTAAGG AGTACAGCCA CGAAAACCAA CCTACCATCT TGATCCACCA AGGAAAAAGC
GACGGCTTCT ACAAAGATAA ACAGTTGCAA CCAGAGATAT TTGAGGCTGC TGCCAAAGAT
GCTGGCTACA AAGGAGGTGT AGACTTGAAT ATCGTAGAAG GCTATGATCA TTCGTATTTC
TTCATCGCTA CCTTTGTGGA AGACCATGCC AAGCACCATG CTAAGTATTT GGGTTTGGTT
GAATGACTAG CCGTGAATCG GTCCAGCAAG ATATGAAAGG ACGACCCTTG CCATATATAA
GTCTTAGAGA TGCTAGATAA CTTAAGTAAA AGACACGTC
 
Protein sequence
MSFTTTAEIA QFGGKLYKLS HNSVTTKTKM DVNVFVPSKK DESTKLPVLL YLSGLTCTPN 
NASEKSFFQY FAAKYGFAIV FPDTSPRGAN IAGEDDSWDF GTGAGFYVDA TTDPWKNNYK
MYSYVHEELQ SELASQFPDL DFSRISITGH SMGGFGALSG FLKNPGKYQS VSAFSPISNP
STCPWGEKNF GNYLGPDKEA WYKYDPTHLI KEYSHENQPT ILIHQGKSDG FYKDKQLQPE
IFEAAAKDAG YKGGVDLNIV EGYDHSYFFI ATFVEDHAKH HAKYLGLVE