Gene PICST_65387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_65387 
SymbolRPL26A 
ID4838178 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp457893 
End bp458855 
Gene Length963 bp 
Protein Length127 aa 
Translation table12 
GC content37% 
IMG OID640389493 
Productribosomal protein L26A (L33A) (YL33) 
Protein accessionXP_001383722 
Protein GI126134395 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01080] ribosomal protein L24p/L26e, archaeal/eukaryotic 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAA TCAGTCAAGG TAAATATCGA TTCAAGAATG CGGAATACAG TATAGTCGTG 
GATAGAGTCT TGAGAGTTGA ATAGGTTTTG ACATTCCCTA TTTGAAGATA TCGATGAAAT
GAATCCAAGT TGAGCAGTGA TCACTTTATC CATACGAAAA AAGACAAAAT TGTAGCTTCC
AAGTCAAATA ATATTGTCCA AGCAGTTGTT AGATATCAAC TAAAGATGAA GGTATTCAAC
CTAGTGAATC CTGTAGTGTC ATTGTCTTTC CAAGTGTTAT CATAAATTTT GAAGATTTTT
ATCAAGACAT CGCAATTCAA GTCCCCATCT CAAGTTCCCA ATGACCAGTT GAAATCTTTT
CATTGCAGAG ATATCCAGAG TGACTTCATC CATATACCTA ACGTTCGAAC TTGTTCAATA
AGTACTCAGC TCGACTCCAC GATTCATGTT ACAGCTTTAT ACCAATAAGA CCAAACAGTA
TACTAACAGT TTTCTAGACG TTTCTTCTTC TCGTTCTAAA GCCAGAAAAG CTTACTTCAC
TTCCTCCTCT GTGGAAAGAA GAGCTTTGTT ATCTGCTCCA TTGTCTAAAG AATTAAGAGA
ACAGTACAAC ATCAAGTCCT TGCCAATCAG AAAGGAAGAT GAAGTCTTGG TTGTCAGAGG
TTCCAAGAAG GGTTCCGAAG GTAAGATCAA CTCCGTCTAC AGATTGAAGT TCGCTGTCCA
AATCGAAAAG TTACAAAAGG AAAAGTCCAA CGGTGCTTCC GTCCCAATCA ACATTCACCC
ATCCAAGGTT GTCATCACCA AGTTGCACTT GGACAAGGAC AGAAAGGCCT TGATCGAAAG
AAAGGGTGGT AAGCTCGAAT AAATTATTTT CATATTGTCA TAAATTCTAT ACATAAAGGA
TGAATATCCG AGACATCTAA ATTCTGTGTT TTATATAATA TGAATGTATT TTAATGGTTC
CGT
 
Protein sequence
MAKISQDVSS SRSKARKAYF TSSSVERRAL LSAPLSKELR EQYNIKSLPI RKEDEVLVVR 
GSKKGSEGKI NSVYRLKFAV QIEKLQKEKS NGASVPINIH PSKVVITKLH LDKDRKALIE
RKGGKLE