| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58009 |
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| Symbol | HAP1.2 |
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| ID | 4838313 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 381492 |
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| End bp | 384710 |
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| Gene Length | 3219 bp |
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| Protein Length | 1047 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389628 |
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| Product | Fungal transcriptional regulatory protein |
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| Protein accession | XP_001383702 |
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| Protein GI | 150864741 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.513512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0535661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGA AACGCCAGAG ACAGCGGAAC AGAGTTCCCG TGTCATGTCT CAACTGTAAG
AAGCGTAAGG TCAAATGTGA CAAGGGCAAG CCGTCCTGTT CAGGGTGTAT CAAGAATGGT
GTGCCGCATC TTTGCGAGTA TTTGGAGCCA GTGTGGTCGA AAAAGAGTTC TCAGGTGAAG
GCAGAAGACG CAGAAGACTC ACATGATGCG AACGCATCTT TACTACAAGT CAAGATCGAA
GAGACGAGTG AGTTTAAACA GTTTCGAGCG CATACTGACA AAGTCATCCT TTCTCAAAGA
AAGGAGATCG ACGACTTGAA GCGACAGCTT TCGGTGCTCC AGCAGCTCTC GCCGAAGGTC
CACGATGCCA CGGCTATGGG CTGTAAGCCT ATCTTGATTT TGACGAAGTT GAACCTCTCT
CTCGTTAACA ACCGAGATCC ACTCACAATT CACCACGATC CAGCATACAG TGTAATAGGA
CGTACTAGTT CTAAAGTTAA CCACATAGAT ACGTACTCGT GGATCAACTT GATTAAATTG
GATCCACAGC TTACCACTCT CTGGTTCAAA ATCACAAATC TCCAGAAGAT CTACCACATG
TACAAAATGA ACATGTTGAA CAACACTTCT AGAAACAGCC CGGGAGCCTT CAGCTTACCA
AACCAGTCTG TCACATCCAA CCCTTTGTCG AAGAAATCAC CCTATAGAAT CAACGAAATC
GACTTCACCT ACAGTGTGGT CAAGTCTGAA GAGCCAAATA AATTAAGGTG TCCAGTTATC
GAGTGCGATT TCAACTTCAT GACAGAAGAC CAGATCACAC CAAGTCCAGT AGGTGGGATA
AGCTCTCCTG TTCCTCTGGC TCGATCCACT GATACCCCAA GGAAGTACAA CACTGTAGTA
CCAAATCAGT ATGGAACGGA ACAGGAGCAA TTCGCTTATC ATGACCTCGT ATCGGAGAAG
GGAAGAACGT TGTTACTTAA GGTTCAGAAC CTCTGGGATT CCTCGCTCAA CTTGGTGCGA
GGAAACGAAA AGATCAATTT CAAACAGCTC TATTTCCTCA TCGACTTCTA CTTCAACAAC
AAGGTGTACG ACATCGAATC GAGGCATATA CTCTCCTTCT ACAAGATAGA AATTCAGAGT
ATAATTAAGA AGAACGGGAA TGAGATATCC ATAAATATTG CCAATGATCC TAGTCTTAAA
TTGACTGACG AACAGCTTTT CGAGCGCCTT AAGATGAAGG GAGTCTACTT GTGTATGTTA
GCGTTGATAA TCGAGGAGTC GTTGGATACC TTGAGACTGA ATGTTAAAGT GGGGTTAGAA
GAAGATATTG GCCTCAAGTT CCGTTCATTG TTTCCTACGG AAGTAGTCTA TGTTGGGCAA
GGCTCCAAGT TCAGAAATAC TTTGTACATA GTCCAGGAGT TTGTGTTGCA CATAACCAAC
TTGAAGTTTT CAGAAACATC TTCTCCGTCT CTTTGCACCA TAGCTTGTTA TATAACATTG
CTTAATCGTG AAGTCGCCGA ATACAAAAAA GACGGTGCAA CCTCAGATCC AAAGCCAGGG
TTCACAAGCT TGTTCACTGT ATTGTTGAAA ACTATATTGA GTGATGAAGG CACAGTCGAA
TTATGGAAAG ACCCTGAGCT CGTCATCTTC AAGGAACAAG AAGCCAGAAA AAGAAACAGA
GACTTGAAAA TCCATATGTG CTATATATGG ACAGATCTTG TCAGATTGGC CAACTTGGTT
GGATTCAACT TTGTGCCCTT GATAAAACAC TCAGAAGCAA TTGACAACCT CTTGCAAAGA
CTCTATACAA AGATAGAAGA GGCAGATCTG CTTCTGTATC ATCTAAAGTA CATCACTTCC
CTCAATTCCC ATAAATTTGA TGAATTAACT ATAACACTTC ATCTCCACTA TTTGATTGCC
AGAATCTCAT CTGCTTTAGC TCATGGGATT TCGAAGGTAG GCGATCTCAA ATTGACTATC
GCCAATTTGG AATCATTGAT CAGACAATGC AGTACCTGGA TTGTAGATTT AGGATTACGG
AAATTGAGGC ATATACGTAG ATTTGAATGC GTTTCAATGT TAATGTATCT CAGATACTTC
ATGAAGTACA TTATATTATT ACAGGCAGAG GAAAGTATGG ACGAAGAGTT GGTAGCATCA
TCTGTTCCGG ATATTTTTAC CAAGTATCTT GAAATCATTG ATCTGTTGAG AAAAGAACTT
ATCAACGACC ATGATGGCAT GAACAAGCAG TACGTGTTAC TGGCGATAAC AGAACTTTTG
ACTAGACTTA TCCAGATTAT TGTTGCTTTG CTAATGAGAG TTTCGAATGA TGATAATATG
ATGTCACAAG AAACTGTATT GCGAATTCAG CTCAACAAGT ATTCGGCTTT CAATGGCGAC
AAGGCAATTT CTGATTACGG AATGAGCATG GAAGACTTAA TTAAGACACA TATAGTAGGC
GTTGTTGAGG ATTCAGTAGA CTTGCTTGCG AAGAGTCCCT TATTGGATAA GGATAAATCT
GGTAAACTCT CGAAGTTATG GAAGTTCTAT TTGACGTTTG TCCGTAATTC CAAGAGAATG
ACAAGCATCA ACTACGCCAA GATACATGCA AACATTCCGC AATTCCGAGG AATCGGGGCT
GCTGGTGATA TGAAGTCTTG CCCAGTTATA ACACCTAGGA GCTTCAAGAA CTCAACGCCA
CCAGCGATTA CATCAAAGGA ATATACGAAA TGTCCTATTT CGCATATCAC CACACCCATA
GACGAAGACA GTTCGCCTAT CGACTCCAGG CCGGGTAAAT GTCCTGTTAA CCACAGTATT
GTAACAACAG CTTCACCAGT GCCAGTGGAT GCTAAGAAAA GGAAGTGTCC ATTTGACCAT
ACAGCACTTG ATAGAAGTTC AATGTCTCAA GGGTATAATG CTATTGAAAG TAATATCCGC
GGTGTGATCA AGCGCCAGAG AGATAGTTCG GACTCGCCTT CGGATGTTGA AAAAAGTAGC
GGATCTACTC CGGTAGTAGA GAGGCCAGAA CCAGTTGTTG AGATGTCTAA CGTCTCCATT
TCTGAGACTC GTCCGGACAA CTTTCCTCCA CCCAATCTTG GTTTCGATTT GCAAGCATTC
AACGACTTTG ACTTTGACTT TTTGCAGAGT GCCGTACTCT TGGATCAGAT TGAGTTTGGA
AACAGCGATG CAGGCAACAT CGAGGGATTT TTTCAATAA
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| Protein sequence | MEQKRQRQRN RVPVSCLNCK KRKVKCDKGK PSCSGCIKNG VPHLCEYLEP VWSKKSSQVK
AEDAEDSHDA NASLLQVKIE ETSEFKQFRA HTDKVILSQR KEIDDLKRQL SVLQQLSPKV
HDATAMGCKP ILILTKLNLS LVNNRDPLTI HHDPAYSVIG RTSSKVNHID TYSWINLIKL
DPQLTTLWFK ITNLQKIYHM YKMNMLNNTS RNSPGAFSLP NQSVTSNPLS KKSPYRINEI
DFTYSVVKSE EPNKLRCPVI ECDFNFMTED QITPSPVGGI SSPVPSARST DTPRKYNTVE
QFAYHDLVSE KGRTLLLKVQ NLWDSSLNLV RGNEKINFKQ LYFLIDFYFN NKVYDIESRH
ILSFYKIEIQ SIIKKNGNEI SINIANDPSL KLTDEQLFER LKMKGVYLCM LALIIEESLD
TLRSNVKVGL EEDIGLKFRS LFPTEVVYVG QGSKFRNTLY IVQEFVLHIT NLKFSETSSP
SLCTIACYIT LLNREVAEYK KDGATSDPKP GFTSLFTVLL KTILSDEGTV ELWKDPELVI
FKEQEARKRN RDLKIHMCYI WTDLVRLANL VGFNFVPLIK HSEAIDNLLQ RLYTKIEEAD
SLSYHLKYIT SLNSHKFDEL TITLHLHYLI ARISSALAHG ISKVGDLKLT IANLESLIRQ
CSTWIVDLGL RKLRHIRRFE CVSMLMYLRY FMKYIILLQA EESMDEELVA SSVPDIFTKY
LEIIDSLRKE LINDHDGMNK QYVLSAITEL LTRLIQIIVA LLMRVSNDDN MMSQETVLRI
QLNNMEDLIK THIVGVVEDS VDLLAKSPLL DKDKSGKLSK LWKFYLTFVR NSKRMTSINY
AKIHANIPQF RGIGAAGDMK SCPVITPRSF KNSTPPAITS KEYTKCPISH ITTPIDEDSS
PIDSRPGKCP VNHSIVTTAS PVPVDAKKRK CPFDHTALDR SSMSQGYNAI ESNIRGVIKR
QRDSSDSPSD VEKSSGSTPV VERPEPVVEM SNVSISETRP DNFPPPNLGF DLQAFNDFDF
DFLQSAVLLD QIEFGNSDAG NIEGFFQ
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