Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57998 |
Symbol | |
ID | 4837752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 781086 |
End bp | 781784 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389067 |
Product | predicted protein |
Protein accession | XP_001383429 |
Protein GI | 150864564 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.116413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTACT ACTTCACGGC CGAATATGGT GACCTGTCTG AGTTGGATGA TTTCGGTTTT GGCAGCGCTT CCGTCCAAAC AGCTACTATA TATATGGGAA GAGATAAGGT AGAGAATGAT CCTCTAATCA AGCATTCGAA CCCTAAGAAT ATCTGGTTTC ACGTGGATAA CTATTCGTCT GCGCATTTGT ATTTGCAGCT CAGTCAAGAG GACCTCATAG CTCCCAAACC GTTTGAAAAA TTTGTCATTG AAGAAAGCTT GCTTGCACAG TTAGCACAAT TGACTAAGGC TAACTCGATC AAAGCTAACA AGTTGAACAA TATTACAGTG ATATATACTC CGGTGGAGAA TCTCCATACT GATGGGTCTA TGGACATCGG GACGGTGACA TTCAAGAATC CAAAACTTGT TAAAAGAGTA AAGGTGGTAA AGAAGGAGAA TGCTATTGTA AACAAGTTGA ACAAGACAAA AACTGAGATA TCTACTGAAA AGTTTATCGA AGAGCAACAG AGTACAGTCA AAGACTTGGA ACGACAACGT AAGAATCAGG CTCGTGCCAC TGACCAGTTG AACAAGCAGT TTGAAGAGCA GAAGGCTAGA AACGCAGACC CATATGGCGA CTTGTTGAAT TCAGACAATA TCCAGCACAG TAGTAATGAG TTCCGAAATG AGAACTGGAC CGAAGAAGAG TTCTGGTAG
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Protein sequence | MVYYFTAEYG DSSELDDFGF GSASVQTATI YMGRDKVEND PLIKHSNPKN IWFHVDNYSS AHLYLQLSQE DLIAPKPFEK FVIEESLLAQ LAQLTKANSI KANKLNNITV IYTPVENLHT DGSMDIGTVT FKNPKLVKRV KVVKKENAIV NKLNKTKTEI STEKFIEEQQ STVKDLERQR KNQARATDQL NKQFEEQKAR NADPYGDLLN SDNIQHSSNE FRNENWTEEE FW
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