Gene PICST_57998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_57998 
Symbol 
ID4837752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp781086 
End bp781784 
Gene Length699 bp 
Protein Length232 aa 
Translation table12 
GC content41% 
IMG OID640389067 
Productpredicted protein 
Protein accessionXP_001383429 
Protein GI150864564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.116413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTACT ACTTCACGGC CGAATATGGT GACCTGTCTG AGTTGGATGA TTTCGGTTTT 
GGCAGCGCTT CCGTCCAAAC AGCTACTATA TATATGGGAA GAGATAAGGT AGAGAATGAT
CCTCTAATCA AGCATTCGAA CCCTAAGAAT ATCTGGTTTC ACGTGGATAA CTATTCGTCT
GCGCATTTGT ATTTGCAGCT CAGTCAAGAG GACCTCATAG CTCCCAAACC GTTTGAAAAA
TTTGTCATTG AAGAAAGCTT GCTTGCACAG TTAGCACAAT TGACTAAGGC TAACTCGATC
AAAGCTAACA AGTTGAACAA TATTACAGTG ATATATACTC CGGTGGAGAA TCTCCATACT
GATGGGTCTA TGGACATCGG GACGGTGACA TTCAAGAATC CAAAACTTGT TAAAAGAGTA
AAGGTGGTAA AGAAGGAGAA TGCTATTGTA AACAAGTTGA ACAAGACAAA AACTGAGATA
TCTACTGAAA AGTTTATCGA AGAGCAACAG AGTACAGTCA AAGACTTGGA ACGACAACGT
AAGAATCAGG CTCGTGCCAC TGACCAGTTG AACAAGCAGT TTGAAGAGCA GAAGGCTAGA
AACGCAGACC CATATGGCGA CTTGTTGAAT TCAGACAATA TCCAGCACAG TAGTAATGAG
TTCCGAAATG AGAACTGGAC CGAAGAAGAG TTCTGGTAG
 
Protein sequence
MVYYFTAEYG DSSELDDFGF GSASVQTATI YMGRDKVEND PLIKHSNPKN IWFHVDNYSS 
AHLYLQLSQE DLIAPKPFEK FVIEESLLAQ LAQLTKANSI KANKLNNITV IYTPVENLHT
DGSMDIGTVT FKNPKLVKRV KVVKKENAIV NKLNKTKTEI STEKFIEEQQ STVKDLERQR
KNQARATDQL NKQFEEQKAR NADPYGDLLN SDNIQHSSNE FRNENWTEEE FW