Gene PICST_57883 details

Gene Information

• Locus tag: PICST_57883
• ID: 4838069
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Scheffersomyces stipitis CBS 6054
• Kingdom: Eukaryota
• Replicon accession: NC_009043
• Strand: +
• Start bp: 1483263
• End bp: 1483952
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 12
• GC content: 44%
• IMG OID: 640389384
• Product: predicted protein
• Protein accession: XP_001383569
• Protein GI: 150864651

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0900155
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0307188
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTGCAG GTGCATTTAT TCTTGGATCC ACAGGCTTGT GCGGGTACCA GATGCTTCGA 
TTTGCCGAGA AATCACTGTT GTTTGACAAG ATCAGCACCG TAGGCCGTAA ACTTCCAGAT 
TTCAAGAGTG AAAAGGTCCA TCTAATCCAA GAGGCAGACA GTGACAAATG GCCCGAGATC 
ATTGAAAAGG AAGCCAAGGG ATACAGCACC TTCTTCTCTG GATTGGGTAG CACCATTGGT 
GCCGCTGGAA GTGCAGAGAA CTTTGAGAGA ATCGACTATG GAATTAACTA CGCAGCAGCA 
AAGGCTGCAA AGAAGGCAGG TGTTCAAACA TTTGTTCTCA TTTCTGCCCC TCTTTCAAAT 
GCAAATTCTC GCTTTCTCTA TATTAGAACG AAGGGTAAAC TCGAGGACGA CATCATAGCG 
TTGAAGTTCG CCAGAACAAT CATTTTGAGA CCAGGTATTT TACTTGGAGA AAGAGAAAAA 
TTCAGAAGCA TTACTGAAAG CATTATAGTA GGCATCTCTA AGTACACCCA TGGTAACTTC 
CTCTCCGCAT TGACTGTGCC TGCGTACGGA GAGGAAATGG GCCAAATTGC TGTCAACTTA 
GCTCTGGAAC CAATTCCACA AAGTCAAACT GAGCCTATTG TCAATATCAT ATCAGCTAAG 
CAGATTACCA ATCTAGCCAA AAAGTTGTAA 

 

Protein sequence

MAAGAFILGS TGLCGYQMLR FAEKSSLFDK ISTVGRKLPD FKSEKVHLIQ EADSDKWPEI 
IEKEAKGYST FFSGLGSTIG AAGSAENFER IDYGINYAAA KAAKKAGVQT FVLISAPLSN 
ANSRFLYIRT KGKLEDDIIA LKFARTIILR PGILLGEREK FRSITESIIV GISKYTHGNF 
LSALTVPAYG EEMGQIAVNL ASEPIPQSQT EPIVNIISAK QITNLAKKL