| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57820 |
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| Symbol | STL1 |
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| ID | 4838168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 746979 |
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| End bp | 748565 |
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| Gene Length | 1587 bp |
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| Protein Length | 529 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389483 |
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| Product | sugar transporter |
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| Protein accession | XP_001383774 |
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| Protein GI | 126134499 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00705004 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATATC TTGATTGGTT AACAGCTAGA ACCAACACTT TCGGGTTGAG GGGCAAGAAG
TTGAGAGCCT TCATCACTGT AGTGGCTGTC ACTGGTTTCT CATTATTCGG ATATGATCAA
GGGTTGATGT CCGGAATTAT TACTGCTGAT CAATTCAACT CTGAGTTTCC CGCCACTAGA
AATAACAGTA CTATCCAAGG TGCCGTCACC TCCTGTTACG AGCTTGGTTG TTTCTTTGGT
GCTGTGTTTG CCTTGTTAAG AGGTGAAAGA ATTGGAAGAA GACCTCTTGT GCTTTGTGGC
TCGCTTATTA TCATCTTGGG AACAGTTATT TCTGTAACCG CCTTCCATCC ACACTGGTCA
TTAGGTCAGT TTGTTATTGG TAGAGTTATC ACTGGTATTG GTAATGGTAT GAATACTGCC
ACCATTCCAG TTTGGCAATC GGAAATGTCA AGAGCTGAAA ACAGAGGAAG ATTGGTCAAC
TTGGAAGGTT CCGTTGTCGC TGTGGGTACA TGTATTGCCT ACTGGTTGGA TTTCGGTTTG
TCTTATGTCG ACAATTCAGT TTCCTGGAGA TTTCCAGTTG CTTTCCAAAT AGTGTTTGCT
TCCGTTTTAT TTGTGGGAAT GTTGCAATTG CCCGACTCTC CAAGATGGTT GGTTGCTAAC
CACAGAAGAG CAGAGGCTCT TCAAGTGTTG TCTGCTTTGA AAGACTTGCC CGAAGACGAC
GAAGAAATTC TTAATGAAGC TGAAGTTATT CAGGAAAGTG TAGACAAGTT TGCTGGACAT
GCTTCCGTCA AGGAAGTGTT TACTGGTGGT AAGACCCAGC ACTGGCAAAG AATGGTTATT
GGATCCAGCA CCCAATTCTT TCAGCAGTTC ACTGGTTGTA ACGCTGCCAT TTACTATTCC
ACTGTCTTGT TTCAAGACAC TATTGGTTTA GAAAGAAGAA TGGCATTGAT TATCGGTGGT
GTTTTCGCAA CTGTCTACGC CATTTTCACA ATTCCTTCCT TCTTCTTGGT CGATACTCTT
GGACGTAGAA ACTTGTTCTT GATTGGTGCT ATGGGACAAG GTATTGCATT CACTATCACC
TTTGCCTGTT TGATTGACGA TACTGAAAAC AACGCCAAGG GTGCCGCAGT TGGTTTATTC
TTGTTTATTT GTTTCTTCGC CTTCACCATC TTGCCATTGC CATGGGTATA CCCACCAGAA
ATCAATCCTT TGAGAACTAG AACTATAGCT TCTGCAATTT CCACTTGTAC CAACTGGATC
TGTAACTTTG CTGTTGTTAT GTTCACCCCT GTCTTTGTCA CTAACACCAG ATGGGGAGCC
TATCTTTTCT TTGCTGTGAT GAACTTCCTT TTCGTTCCTA TTATTTTCTT CTTCTACCCA
GAAACAGCTG GAAGATCGTT GGAAGAAATC GATATCATCT TTGCGAAGGC ATTCGTTGAC
AAAAGACAGC CATGGAGAGT TGCTGCAACC ATGCCAAAGT TGTCCAACCA CGAAATTGAA
GACGAAGCCA ACAGATTGGG CTTGTTTGAC GATGGTACAT TCGACAAGGA AGCATTTGAA
ACCAAAGAAA ACGCATCCAG CAGCTCT
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| Protein sequence | MAYLDWLTAR TNTFGLRGKK LRAFITVVAV TGFSLFGYDQ GLMSGIITAD QFNSEFPATR
NNSTIQGAVT SCYELGCFFG AVFALLRGER IGRRPLVLCG SLIIILGTVI SVTAFHPHWS
LGQFVIGRVI TGIGNGMNTA TIPVWQSEMS RAENRGRLVN LEGSVVAVGT CIAYWLDFGL
SYVDNSVSWR FPVAFQIVFA SVLFVGMLQL PDSPRWLVAN HRRAEALQVL SALKDLPEDD
EEILNEAEVI QESVDKFAGH ASVKEVFTGG KTQHWQRMVI GSSTQFFQQF TGCNAAIYYS
TVLFQDTIGL ERRMALIIGG VFATVYAIFT IPSFFLVDTL GRRNLFLIGA MGQGIAFTIT
FACLIDDTEN NAKGAAVGLF LFICFFAFTI LPLPWVYPPE INPLRTRTIA SAISTCTNWI
CNFAVVMFTP VFVTNTRWGA YLFFAVMNFL FVPIIFFFYP ETAGRSLEEI DIIFAKAFVD
KRQPWRVAAT MPKLSNHEIE DEANRLGLFD DGTFDKEAFE TKENASSSS
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