Gene PICST_57799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_57799 
Symbol 
ID4837838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp268535 
End bp269023 
Gene Length489 bp 
Protein Length162 aa 
Translation table12 
GC content48% 
IMG OID640389153 
Productpredicted protein 
Protein accessionXP_001383682 
Protein GI126134315 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.339062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG CTCAGAAGTT CGAACAGGCC AACGTCCATT ACGCTGACCA ATTCACCAAG 
GGAGACTTAG CCTTACCTCC TGCAAGGAAG GTAGCCGTCG TGATTTGTAT GGATGCTAGA
ATTGACCCAG CCAAGGCTTT AGGCTTGAGC GAAGGTGATG CTCACGTCAT CCGAAATGCT
GGTGGTAGAG CTTCCGACGC TTTGAGAAGT GTCATCATCT CTCAGAGATT GTTGGGAACC
AGAGAAATTG TTGTTGTCCA CCATACGGAC TGTGGGATGT TAACCTTCTC TGATGAACAG
TTGAGAGGAA TTGTCAAGAA GGAAACGGGA CACAGTGTGG ACCATTTCGC CTTCTTACCA
TTCAGCGACT TGGAGGGTAG TGTCAAGGAG GATGTTGAAT TTCTCAAGAA CAGTCCTTTG
GTGTTGGATG TTCCCGTTTC TGGATATGTC TACGACGTCA AGACCGGTAA GGTGAAGAAG
GTTGCTTAG
 
Protein sequence
MSEAQKFEQA NVHYADQFTK GDLALPPARK VAVVICMDAR IDPAKALGLS EGDAHVIRNA 
GGRASDALRS VIISQRLLGT REIVVVHHTD CGMLTFSDEQ LRGIVKKETG HSVDHFAFLP
FSDLEGSVKE DVEFLKNSPL VLDVPVSGYV YDVKTGKVKK VA