Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57768 |
Symbol | LAC3 |
ID | 4837827 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 244292 |
End bp | 245955 |
Gene Length | 1664 bp |
Protein Length | 499 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389142 |
Product | putative lactose permease |
Protein accession | XP_001383677 |
Protein GI | 150864727 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTATACGA TATGTGCTGG TTTATATCTT TGCTCAACCA TGAATGGCTA TGACGGAAGT TTGCAAACTG CTATAGAAAC ACTTCCAGCT TACAGAACGT ACTTCAATCT CAGCAACTCG GCCAGCGATA CTGGTTTGGT GTTCCTGATT TTTCCAGCTG GTGCTATTTG TGCCACAATC TTCATTTGGT TGGGTGATTA TATCGGCAGA GTGCTAACTA TAATCATTGG CTTGGTTGGG ACTATTGTGG GCTCAATAGT TGTAAGCTCT ACCCATAATC ATAGTGCTTA TATCGGTGGG AGATTTCTTC TAAGTTTCTT CTCCACAATT GCTAATTGTA CAGCTGCAAT TCTATTGACA GAGTCTGTTC CATATGATAT GAGATGGTTG GTGGGCTGTT TCAATACATT CTACTACATT GGAAGTATCA TTGCTACATG GACAATGTAC GGCACAAGTA AAAACTTCGA AGGTCCCCAA ACTTTCAAAA TTGGCTTGTG GCTACAGATC CTCTGTCCTG GTATGGCTCT TGTTCTTATC TGTCTGAGTG CTCTATTGGG ATTTGGAGAC TCTCCCAGAT ACTATTATGG CAAGAACAAG ATCGAAACAG CGAGGGACTT CATTATAAAG TACCATGCTA ATGGTGATGT TTCGCATCCG ATTGTTGCTG CAGAGATGGA AGAGTTGGAG TTGTCGTTTC GAACAAATGG GTTCTTGAAA CCAAAGGATT ACCTTAACTA TAGTAATTTT TTCCGTACCA CTTCCAATCG CAAGAGAACA GCATTAGTTG TGGCCTGGTC TTGGTTCAAC CAATTCAGTG GCAACCAGGT GATCACATAC TATATGACTA CCTTGTTCTT AACTTTAGGA ATTAAAAATG CCACAACAAG ATTGCTCTTG ACAGGCATCA ACTCAATTCT CTGCTATATT TTTGCAACAT GTGGAGGTTT GCTTATTGAC CGTCTACCTA GAAGATGGGT TCTCTTGTAT GCCAATGCTG GGTTTGTTAT TTGTTTTGCA GGGTTGGCCG CAGCTGTTAG AGCTTTCCAA GCAGATGCAA ACAACCATAC AGCCGCATCT GCCGGCATTG CCTTTATGTA TTTGTTCATG ACAATCTTCT TTTCCTTTGC ATTCACTCCA TTGCAGCCCA TTTACCCGGC CGAAGTAATG TCCAATGACA TGAGAGGCAG AGGAATGGCT TTGTACTTTT TCATAAGTAA CGTCGCCTCG TTTGTCAACT TGTATTCGGC GCCGGTGGCC ATGCAGAATA TCAAGTATTG GTACTATGTG TTTTTTGTCT TTTGGGATGC TTTCCAGTTT GCCATCATCT ACTTTTTCTT CGTTGAAACT TGTGCTTTGA CCTTAGAGGA AATCGAGGTT GTGTTTAAAG AGAAACATAC CGTGAAAGAG AGTATCAAGT TGTCGAAGAT GGCCCGGTCA CATATCCATC GAAGTTGGAG AAGAAATGAA GCAGATGAGA TTGAGACCGA GAAAGTTAAC ACAGATAACG AGTAATTCTA AGAGAAGCTC GTTATGAGAG AGATATTTGT ATGTAGAAGA GTGTGATTTA TGTTTTAGAG CACAGTAATA AGAGAAAAGA AGAGATAATG AGAGAAGAAG AGATAACGAG AGAAGAATAT ACAGAGCAAA AGACAAATAG CTGA
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Protein sequence | LYTICAGLYL CSTMNGYDGS LQTAIETLPA YRTYFNLSNS ASDTGLVFSI FPAGAICATI FIWLGDYIGR VLTIIIGLVG TIVGSIVVSS THNHSAYIGG RFLLSFFSTI ANCTAAILLT ESVPYDMRWL VGCFNTFYYI GSIIATWTMY GTSKNFEGPQ TFKIGLWLQI LCPGMALVLI CSSALLGFGD SPRYYYGKNK IETARDFIIK YHANGDVSHP IVAAEMEELE LSFRTNGFLK PKDYLNYSNF FRTTSNRKRT ALVVAWSWFN QFSGNQVITY YMTTLFLTLG IKNATTRLLL TGINSILCYI FATCGGLLID RLPRRWVLLY ANAGFVICFA GLAAAVRAFQ ADANNHTAAS AGIAFMYLFM TIFFSFAFTP LQPIYPAEVM SNDMRGRGMA LYFFISNVAS FVNLYSAPVA MQNIKYWYYV FFVFWDAFQF AIIYFFFVET CALTLEEIEV VFKEKHTVKE SIKFNKRKEE IMREEEITRE EYTEQKTNS
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