Gene PICST_57768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_57768 
SymbolLAC3 
ID4837827 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp244292 
End bp245955 
Gene Length1664 bp 
Protein Length499 aa 
Translation table12 
GC content41% 
IMG OID640389142 
Productputative lactose permease 
Protein accessionXP_001383677 
Protein GI150864727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTATACGA TATGTGCTGG TTTATATCTT TGCTCAACCA TGAATGGCTA TGACGGAAGT 
TTGCAAACTG CTATAGAAAC ACTTCCAGCT TACAGAACGT ACTTCAATCT CAGCAACTCG
GCCAGCGATA CTGGTTTGGT GTTCCTGATT TTTCCAGCTG GTGCTATTTG TGCCACAATC
TTCATTTGGT TGGGTGATTA TATCGGCAGA GTGCTAACTA TAATCATTGG CTTGGTTGGG
ACTATTGTGG GCTCAATAGT TGTAAGCTCT ACCCATAATC ATAGTGCTTA TATCGGTGGG
AGATTTCTTC TAAGTTTCTT CTCCACAATT GCTAATTGTA CAGCTGCAAT TCTATTGACA
GAGTCTGTTC CATATGATAT GAGATGGTTG GTGGGCTGTT TCAATACATT CTACTACATT
GGAAGTATCA TTGCTACATG GACAATGTAC GGCACAAGTA AAAACTTCGA AGGTCCCCAA
ACTTTCAAAA TTGGCTTGTG GCTACAGATC CTCTGTCCTG GTATGGCTCT TGTTCTTATC
TGTCTGAGTG CTCTATTGGG ATTTGGAGAC TCTCCCAGAT ACTATTATGG CAAGAACAAG
ATCGAAACAG CGAGGGACTT CATTATAAAG TACCATGCTA ATGGTGATGT TTCGCATCCG
ATTGTTGCTG CAGAGATGGA AGAGTTGGAG TTGTCGTTTC GAACAAATGG GTTCTTGAAA
CCAAAGGATT ACCTTAACTA TAGTAATTTT TTCCGTACCA CTTCCAATCG CAAGAGAACA
GCATTAGTTG TGGCCTGGTC TTGGTTCAAC CAATTCAGTG GCAACCAGGT GATCACATAC
TATATGACTA CCTTGTTCTT AACTTTAGGA ATTAAAAATG CCACAACAAG ATTGCTCTTG
ACAGGCATCA ACTCAATTCT CTGCTATATT TTTGCAACAT GTGGAGGTTT GCTTATTGAC
CGTCTACCTA GAAGATGGGT TCTCTTGTAT GCCAATGCTG GGTTTGTTAT TTGTTTTGCA
GGGTTGGCCG CAGCTGTTAG AGCTTTCCAA GCAGATGCAA ACAACCATAC AGCCGCATCT
GCCGGCATTG CCTTTATGTA TTTGTTCATG ACAATCTTCT TTTCCTTTGC ATTCACTCCA
TTGCAGCCCA TTTACCCGGC CGAAGTAATG TCCAATGACA TGAGAGGCAG AGGAATGGCT
TTGTACTTTT TCATAAGTAA CGTCGCCTCG TTTGTCAACT TGTATTCGGC GCCGGTGGCC
ATGCAGAATA TCAAGTATTG GTACTATGTG TTTTTTGTCT TTTGGGATGC TTTCCAGTTT
GCCATCATCT ACTTTTTCTT CGTTGAAACT TGTGCTTTGA CCTTAGAGGA AATCGAGGTT
GTGTTTAAAG AGAAACATAC CGTGAAAGAG AGTATCAAGT TGTCGAAGAT GGCCCGGTCA
CATATCCATC GAAGTTGGAG AAGAAATGAA GCAGATGAGA TTGAGACCGA GAAAGTTAAC
ACAGATAACG AGTAATTCTA AGAGAAGCTC GTTATGAGAG AGATATTTGT ATGTAGAAGA
GTGTGATTTA TGTTTTAGAG CACAGTAATA AGAGAAAAGA AGAGATAATG AGAGAAGAAG
AGATAACGAG AGAAGAATAT ACAGAGCAAA AGACAAATAG CTGA
 
Protein sequence
LYTICAGLYL CSTMNGYDGS LQTAIETLPA YRTYFNLSNS ASDTGLVFSI FPAGAICATI 
FIWLGDYIGR VLTIIIGLVG TIVGSIVVSS THNHSAYIGG RFLLSFFSTI ANCTAAILLT
ESVPYDMRWL VGCFNTFYYI GSIIATWTMY GTSKNFEGPQ TFKIGLWLQI LCPGMALVLI
CSSALLGFGD SPRYYYGKNK IETARDFIIK YHANGDVSHP IVAAEMEELE LSFRTNGFLK
PKDYLNYSNF FRTTSNRKRT ALVVAWSWFN QFSGNQVITY YMTTLFLTLG IKNATTRLLL
TGINSILCYI FATCGGLLID RLPRRWVLLY ANAGFVICFA GLAAAVRAFQ ADANNHTAAS
AGIAFMYLFM TIFFSFAFTP LQPIYPAEVM SNDMRGRGMA LYFFISNVAS FVNLYSAPVA
MQNIKYWYYV FFVFWDAFQF AIIYFFFVET CALTLEEIEV VFKEKHTVKE SIKFNKRKEE
IMREEEITRE EYTEQKTNS