| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57750 |
|---|
| Symbol | |
|---|
| ID | 4838053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | + |
|---|
| Start bp | 547719 |
|---|
| End bp | 548597 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640389368 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001383381 |
|---|
| Protein GI | 126133713 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.31588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACT TTAAGATCAA GGCCGGTTTG GCCCAAATGT TGAAGGGTGG TGTCATCATG
GACGTCGTCA ATGCCGAACA AGCCAAAATC GCCGAACAGG CTGGAGCTTG TGCCGTCATG
GCCCTTGAAA GAATCCCTGC CGACATGAGA AAGTCCGGCC AGGTGTGCAG AATGTCGGAC
CCAAAGATGA TCAGAGAGAT TATGGAGGCT GTTTCCATCC CTGTCATGGC CAAGGTCAGA
ATCGGCCACA CCGTAGAAGC TCAAATCTTA GAAGCCTTGT CCATTGACTA CATTGACGAA
AGTGAAGTCT TGACTCCAGC CGACAAGATC AACCACATCG CCAAGTCCAA CTACAAGGTT
CCATTTGTGT GTGGAGCTAA GGACTTGGGC GAAGCCTTGA GAAGAATCAA CGAAGGTGCT
GCTATGATCA GAACCAAGGG CGAAGCCGGT ACCGGAGACG TCTCTGAAGC CGTCAAGCAT
ATCACAATCA TCAAAAAAGA GATCGAGGAT GCTGCAGCCT TGAAGAGCGA AGAAGAAATC
GCTGCTTACG CCAAGCAATT GAGAGTGCCT GTGGCTCTTT TGAAGGAAGT ATTGGAGTTG
AAAAAGTTGC CTGTTGTCAA CTTCGCTGCT GGTGGTGTAG CTACTCCAGC CGACGCTGCT
TTGTTGATGC AATTGGGCTG TGACGGGGTC TTTGTTGGAT CTGGTATCTT CAAGGCCAAC
AACCCAGCCA AGTTGGCTAA GGCAATTGTC AACGCAACCA CTAACTACGA CGACCCAGCC
AAGATCTTGG AATACTCTAC AGACTTGGGT GAGTTGATGG CTGGTGTTAG CATCGACTCT
ATCAGAGACA ATGAAAGATT GTCCCAGAGA GGATGGTAA
|
|---|
| Protein sequence | MSDFKIKAGL AQMLKGGVIM DVVNAEQAKI AEQAGACAVM ALERIPADMR KSGQVCRMSD
PKMIREIMEA VSIPVMAKVR IGHTVEAQIL EALSIDYIDE SEVLTPADKI NHIAKSNYKV
PFVCGAKDLG EALRRINEGA AMIRTKGEAG TGDVSEAVKH ITIIKKEIED AAALKSEEEI
AAYAKQLRVP VALLKEVLEL KKLPVVNFAA GGVATPADAA LLMQLGCDGV FVGSGIFKAN
NPAKLAKAIV NATTNYDDPA KILEYSTDLG ELMAGVSIDS IRDNERLSQR GW
|
|---|
| |