| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57701 |
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| Symbol | SCO1 |
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| ID | 4838144 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 1238658 |
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| End bp | 1239566 |
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| Gene Length | 909 bp |
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| Protein Length | 297 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389459 |
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| Product | Putative cytochrome C oxidase assembly protein |
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| Protein accession | XP_001383869 |
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| Protein GI | 150864872 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0857845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0569846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCTC GAATTGCGTT CAGGAGTACC AGAAAGTCGG TTGTGTATTC AGCGAGAAGT
TTCGGTATTT CGTTGAGGCG TTTCAACGAA ATTCCAAAGA TTCCCCAGTC TGGTTCAGAT
AGTTCAAACC CCGTTCCAGG CTCCAAGAAG AAAAGACCTT TGAGTCGTGT AGCTATAGGC
TCTCTGGACT CTGGAAAGAA GTATGCCGAA AACAGCAGTA TCGAGTTTGC GTCCTGGAAG
GCCGTTCTTT TGCTCTTAGT ATTGGGAGGT GGAGCAACGT ATTGGTTCAG TAAAGAAAAG
GAAAGAATCC GGATTCAGAA GGAGGTTGAC TCCAAGAGAA GTATCGGGAA GCCGTTGATC
GGAGGACCAT TCAGTTTGAT TGATACTAAA GGGCAACCTT TTACCCACAA GAATTTGGTC
AATGACAACA AGAAGTTTTC TATAATTTAC TTTGGCTTCA CTCACTGCCC AGACGTCTGT
CCTGATGAAT TAGACAAATT GGGTGACATG TTGGAAGAGT TGAAGAAGAG CAAAATTGAG
ATGCAACCGA TTTTCATCAC ATGCGACCCC GCCAGAGACT CTCCGGAAAT TGTAGAGCAA
TACTTGGAAG ACTTTCATCC GGATATCATT GGCTTGACTG GTACTTATGA CGAAGTTAAA
AACTGTTGCA AGAAATACAG AGTGTACTTC CTGACTCCGG CAGATATCAA GCCGGGCCAG
GACTACTTGG TGGACCACTC TATCTTCTTT TATGTGATGG ACTCTGAGGG GCAATTTGTA
GATGTAATTG GCAGAGAAGC CACTGCTGCT GAAGGCGTAG AGAAGATCAA GAAACAGATC
GATGCTTTTA TCCCAAAAGA GGAAAGAGAA GCTAGAAAGA AGTCGAAACT TAGTTTTCTC
TACAAGTAG
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| Protein sequence | MLSRIAFRST RKSVVYSARS FGISLRRFNE IPKIPQSGSD SSNPKKRPLS RVAIGSSDSG
KKYAENSSIE FASWKAVLLL LVLGGGATYW FSKEKERIRI QKEVDSKRSI GKPLIGGPFS
LIDTKGQPFT HKNLVNDNKK FSIIYFGFTH CPDVCPDELD KLGDMLEELK KSKIEMQPIF
ITCDPARDSP EIVEQYLEDF HPDIIGLTGT YDEVKNCCKK YRVYFSTPAD IKPGQDYLVD
HSIFFYVMDS EGQFVDVIGR EATAAEGVEK IKKQIDAFIP KEEREARKKS KLSFLYK
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