Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57620 |
Symbol | |
ID | 4837968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1392019 |
End bp | 1393923 |
Gene Length | 1905 bp |
Protein Length | 635 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640389283 |
Product | predicted protein |
Protein accession | XP_001383557 |
Protein GI | 150864645 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.178714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.258096 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAAGA CTGAACCCCA GAATTTGCGT CTCTATGACC TTGAGGGATG TCTCCCTTCC TACAACGTGA AATCCACAAT TGTACAATGT GTTGGCACTG ACTATGTGTT TCTATATGGT GGTTTCGATG ATATGGATAT TTTGGATAGC AATGTGTACT TATTGAACTT GAAGACCAAG ACCTGGGAGG TGGACGATAA GCATGATGGT TTATATAGAG AGGGTCATCT GGCTGTCTAT ATAAGCAATG GCAATATTTT AGTGTTCGGA GGTGTACCAT ACGATGAGTT TCCAGTACCT TCAGTTACTC GTCAAAGAAC TGCTCCTGCA ACGTTTCGAA AAGATAGTTT GATGATGATC TACAACATAT ACGACAGGAA ATGGATCGGA CCTCCACCTT TTGCGCTTGA TAATGCGCCA TCTTCGAGAT CAAGACATGC GTGCTGTCTT TCTCCGGACC ATTCAAAGCT ATACGTAAGC GGAGGACTTG TTAAGTCTGC TCCATTGGAT GATTTATATT GCTATGACTT GACTTCTGGT TCGTGGCTGG GTCCAATAAG ATTCGTATCT CGTTTTGATC ATTTCATAAC AGTATATGGC GATAAGCTAT ATTCATTTGG AGGTTTGGAT AAGGACATGA ACCATGTCAA AGACACAATT ACTTTCTATT CATTTAAGAA TCATACTATT GGCCAAATCT CCATAATACA AAAACCAGAG TCATCCACTA TACTAGGGAA GGAGGACGAG CTCAACCTGG AGTTTGATTC TCATAGCACA TACAATCCAA ATGATTGCGA ACGTCTATAC GTCGACTCAG TCATTAATCT GTCTATCATA TTGGATATTT CTCTACCTTC CTGGAGTGCT ACATCTGGTG GGTTGATCAT ATCTAATTTC GATCTTGATG ACTTCGAAAC TCAAGAAACA TTTAATATTC GTAATATTGC CATGATCTAC AATAGAGCTA ACAAGATCGA CGTCATGAAC TATTCATGGA AAGAAACATT TGTCAAAGAA AATGGAACCT TGTACTTGTT GGGGACAAAC TTCAACAGTA CAAATGTGGT TCCTGATACA GCGAATGCAA CAGCAGATTC AATACCTGGC GAAGATGGCA CCACTGATGG CATGGACGAA ATGGAAAACG AAGAAGCATC GGGCATAGCT AAGTTAGGTG CTCTTTTTGA GATGAAATTG AGTGATCTCG GAATACCATT CCGCAAAAAT ATTAGCCTCG AGAAAAGTCA AATCCAGAGT AGTATTCCAT TATCAATGGA TTACGAGAGG TTTCTTTTGA GCGAGCAATT CACTGATTTC GAGATTGTAA CTTTGGCCGA TGAAGAAGAT AGAGATAAAT ATCAAGAATC TTTCTCTATA ACGGAACTGG ACCCTTCAAG TATCAAAATT GTAAAGGTTC ATAAGGCAAT TCTATTATCC AGGTGGCCCC ATTTTCAAAG ATTAATTGCA ATTGGGATGG CAGAAACAGT TCTGAATAAG ATGTTTATTC CTGAACCACA TCGTTGGGTC AAAGGATTGC TTTATTACTT GTACGTTGGA ACAATAAATG TTGATTCTTA TGTTCATGGG CCATATACAA TATTGGATTA CCTAGGTTTG TCAATGCTTG CAAATATGTA CGAGCTTCCA GATTTGAGGA CTTTGGCGAT GCACAAATTG TTCAAACTAT TCGACCAACT TCAACTATCA TTTGACGCGC AGAACGATGA GATGATTTCA ATATTGCTTA AGCTCTGGCG GGAATTATCC TTTGCAAACG AAATCGTCCT TCGTGTGAAA GTTATGGATA TGATAAGAAG ATACTGGGCT ACTATTACTC GGTCAAAGCC ATTCTTCTCG TTGTCCAAGG ATGAAATAGT AAAACTTTGC CAAGATTCAA GTGAT
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Protein sequence | MVKTEPQNLR LYDLEGCLPS YNVKSTIVQC VGTDYVFLYG GFDDMDILDS NVYLLNLKTK TWEVDDKHDG LYREGHSAVY ISNGNILVFG GVPYDEFPVP SVTRQRTAPA TFRKDSLMMI YNIYDRKWIG PPPFALDNAP SSRSRHACCL SPDHSKLYVS GGLVKSAPLD DLYCYDLTSG SWSGPIRFVS RFDHFITVYG DKLYSFGGLD KDMNHVKDTI TFYSFKNHTI GQISIIQKPE SSTILGKEDE LNSEFDSHST YNPNDCERLY VDSVINSSII LDISLPSWSA TSGGLIISNF DLDDFETQET FNIRNIAMIY NRANKIDVMN YSWKETFVKE NGTLYLLGTN FNSTNVVPDT ANATADSIPG EDGTTDGMDE MENEEASGIA KLGALFEMKL SDLGIPFRKN ISLEKSQIQS SIPLSMDYER FLLSEQFTDF EIVTLADEED RDKYQESFSI TESDPSSIKI VKVHKAILLS RWPHFQRLIA IGMAETVSNK MFIPEPHRWV KGLLYYLYVG TINVDSYVHG PYTILDYLGL SMLANMYELP DLRTLAMHKL FKLFDQLQLS FDAQNDEMIS ILLKLWRELS FANEIVLRVK VMDMIRRYWA TITRSKPFFS LSKDEIVKLC QDSSD
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