Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57608 |
Symbol | |
ID | 4838061 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 1106637 |
End bp | 1108106 |
Gene Length | 1470 bp |
Protein Length | 474 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640389376 |
Product | predicted protein |
Protein accession | XP_001383843 |
Protein GI | 150864853 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.371537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCACG TCAACGCCAA TTATACACCG TGGAATCTTT TGGCCTTCAA CTTCACTGGA TTTGCCTGTG TAGCCATAGT GGTTTTTCTC TCTTCTACGC AGCCGTTCTA TGTAAGTGAA GTTATTGGAA TACAGGCAGA CGCTAAAATA GGTGCTATCA TCGGAACTTT GGGATTTACC GATGAGCTTG TCTCGATAAT ATCATCGCCA TTGGTGGGAA CCTTGACAGA TAAGTTGAAC TCCATAGGCA TACAAGGCAC GCGCTATATC CCCAGTATCA GTTTCCTCAT TTTGGCTTTG AGTTTGGTCG GGTATGCTGT GGTCAGTACA AACATATATC CAGATGTTAT TTTTTTCAGA TGCATATTTG CACTTGGAGT CACTAGTTGT ATGAGCATGA TTACGGTTAT GCTCAACGAA CTCACCAACT CGGACTTTGC GTTCCAGAAG TTCCTCTTCT GGAGACACTA TCAACAGCAA GCCTTCGATA GTCTTGAATT GAATGATCCC GAAGACAAAA AGAATGGAAA GTATTCAGCA CTCATCGGTA TTTCAACCGG ATTAGGTGCT ATCTTCTCCG TATCTTTCTT CTTGACTTTG CCAATCAAAT TGGTTAGCAG TAACCCTGAT CTCACCTTGA AGGAAGGATT GAAATATTCG TACTTGATCG TGGCAGCCTT CGCTGTAGTA GCTTTTCATG TTCTCGTTGT ATTCTTGTAT GATAGCAACA AGAAGAAACC CAACACTATT GAAGAATCTG AGTTGTTACT TGTAGAAGAA AGTGAAGTAA CAGAAGAACT GGACGAGCCA GAAGAAAAAT TGCCCTATTT TAAGCTACTT GCCAGGGGAT TCGAGATCTC CCGATCCAAC CATAGAGTAC AATTATCATA TATTGGAGCT TTTGTTGCGA GATCAACTAC GGTCACCACT TCTGTATTCA TACCTCTATT GGTGTACAAC TTCTACTACA AGAACGGAAA GTGCAACACT ACAGACTTTC CTAACAAAAA GAACTGCAAC GACGGGTATA TTTTCTCGGC TATTTTAACC GGAGTAGCAC AAACAATTGC ACTTATATCG TCTCCGTTAT GGGGCTACAT GATTGACTCC AGGAGAGTCG GAAAATTCAA GACATTACTT GTTTCAGCTA TCGCTGGCAT AATCGGCAAT TTCGGCCTTT GTATCTCTGG AAGCACCACC AAAGGTGCTT ACGATCCTCA TACTGTAATC TGTTTTGTGA TGGTTAGTCT CATAGGCATG TCGCAGATCG GAATTATCAT CACCAGCATG AGTGTATTGA GTGGCCTCAC CCACAACCCC AAGAATATGG GTTCACTCAG CGGGTTATAT AGTTTAAGCG GAGGTCTCGG GATCTTGCTC ATTACCAAAG TTGGTGGCTT ATGGAGCGAC TACTGGATCT TGGGGCCATT TTTCCTCTTG GGTGCGTTCA ATACCGTTTT GCTTGTAGTT
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Protein sequence | MYHVNANYTP WNLLAFNFTG FACVAIVVFL SSTQPFYVSE VIGIQADAKI GAIIGTLGFT DELVSIISSP LVGTLTDKLN SIGIQGTRYI PSISFLILAL SLVGYAVVST NIYPDVIFFR CIFALGVTSC MSMITVMLNE LTNSDFAFQK FLFWRHYQQQ AFDSLELNDP EDKKNGKYSA LIGISTGLGA IFSVSFFLTL PIKLEGLKYS YLIVAAFAVV AFHVLVVFLY DSNKKKPNTI EESEFEVTEE SDEPEEKLPY FKLLARGFEI SRSNHRVQLS YIGAFVARST TVTTSVFIPL LVYNFYYKNG KCNTTDFPNK KNCNDGYIFS AILTGVAQTI ALISSPLWGY MIDSRRVGKF KTLLVSAIAG IIGNFGLCIS GSTTKGAYDP HTVICFVMVS LIGMSQIGII ITSMSVLSGL THNPKNMGSL SGLYSLSGGL GILLITKVGG LWSDYWILGP FFLLGAFNTV LLVV
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