| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57562 |
|---|
| Symbol | IME4 |
|---|
| ID | 4838116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | - |
|---|
| Start bp | 857672 |
|---|
| End bp | 859288 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640389431 |
|---|
| Product | activator of IME1 Predicted N6-adenine RNA methylase IME4 |
|---|
| Protein accession | XP_001383795 |
|---|
| Protein GI | 150864816 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4725] Transcriptional activator, adenine-specific DNA methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACG ATTTGTCACA TTTCTCGTCG TTCATTTCCT TTATGCTAGA CTTCGATAGT
GTTCTTGATG AGCCAGTTAG AGGAGAACTA CGTACTATTA TGGTTCTCTA CCAGATGAAG
CAGAAAAGCG ACGACGGAAA ACAAGAATCT GGTTCAGGCG ATGGAACTTC AGATTATGGA
TCTTTTCTTC AATATTTAAT TCAACTCAAT ACAATATCAG GAAACTGTTT GGTATTTGAT
AGGGAAATTA ATGAAAACAA CAGGAATGTC AAGCTAGTTT ATGTCAACAG AACACGGTTG
GTGATGTTGA AAGATCGTAT TGAAGGCAAA CGAGGTTGGA CTATTCCATA TGAAGTCGTT
CTGAAACAAA GAAGTTTCAA GAATAGTAAC GAAGAGTTAT TGGCTATTCT ATCAAGTCCA
CTTCATAGCA GATTGGAAAT TAATGGTGTG AATAATTCAA CGAATGAAAT AGCTGAGTGT
GACTATGAAA CACTCGATAA GTTAATTCGA GCAACTTCAG CCAGATCAGT TTTGAGCAAA
GAGAAGGCGA GATTGAAGAC TGTAGAGAAG AAATACTTTC AAGTTTGTAA CAATGTGAAC
CATAACCAGA TACTTGCCAA TGTCTGTTTC AAGAAAAATG TAGATCACCA GAGCATCACC
AAAAACTCGA TTCCGGGAAT GGCCCATATG CACCATAAGA TCGACGAATG TAGAAACATG
ATATCTCAGG ATATATATAG CTGCTCCAAG TCTAAGATCC ATTTCTTGCC AATCATCAAT
AGCCACACGG AAGTGTTTCT GGGTGATTGT TCGTATTTGG ATACCTGCCA CAAAATGAAG
ACATGTAGAT ATGTCCATTA TTTCACGTTA AACCCTCTTA TCGAGGGGAA TGACAATAAC
AGTAGTGCAG ACGAAAACGA AATTCAAAGA CAATGTTTGG CTCACGAGTA TACTATTGGT
GAATGTTTCA GTGAGAATCA TCGAAAAGTG ATTCCACCGC AATGGATCAA CTGTGATGTG
CGCTATTTGC CATTTTCGGT ATTGGGTAAA TTCGCAGCCA TTATCTCAGA TCCAGCATGG
GATATTCACA TGTCGCTTCC ATATGGAACT TGTAAGGATG AAGAGTTGCT TTCATTACCA
ATGCACGAGC TTCAAGACGA AGGAATAATT CTTCTTTGGG TAACTGGTAG ATCTATACAG
ATAGGGAGAA GGGCTTTGTT GCAATGGGGT TATACCATTT CTGACGAGGT TATCTGGGTG
AAGCTCAACC AGTTGAAAAG AACCATTGTT ACAGGAAGAA CAGGCCATTG GTTGAACCAC
TCGAAAGAAC ACTTACTTGT AGGAGTTAAG GGCAATCCAG CATGGCTAAA CAGAAAGATA
GATACAGATA TCGTGGTTAG TGCTACTCGT GCCACTCTGC GTAAGCCAGA TGAGATATAC
GACATTGTAG AACGTTTGGT CGGCGTTCAT TCCAGAAAGC TCGAGATCTT CGGTAGAGAC
CACAATACTC GTCCCGGTTG GCTAACTATT GGTAACCAAC TTCAAGGTTC ATTTATCTAC
GAGACTGAAG TCAAGACAAG ATACCAGCAG TATCTTGGCA CTAAGGAAGG TCCTTAA
|
|---|
| Protein sequence | MKHDLSHFSS FISFMLDFDS VLDEPVRGEL RTIMVLYQMK QKSDDGKQES DYGSFLQYLI
QLNTISGNCL VFDREINENN RNVKLVYVNR TRLVMLKDRI EGKRGWTIPY EVVSKQRSFK
NSNEELLAIL SSPLHSRLEI NGVNNSTNEI AECDYETLDK LIRATSARSV LSKEKARLKT
VEKKYFQVCN NVNHNQILAN VCFKKNVDHQ SITKNSIPGM AHMHHKIDEC RNMISQDIYS
CSKSKIHFLP IINSHTEVFS GDCSYLDTCH KMKTCRYVHY FTLNPLIEGN DNNSSADENE
IQRQCLAHEY TIGECFSENH RKVIPPQWIN CDVRYLPFSV LGKFAAIISD PAWDIHMSLP
YGTCKDEELL SLPMHELQDE GIILLWVTGR SIQIGRRALL QWGYTISDEV IWVKLNQLKR
TIVTGRTGHW LNHSKEHLLV GVKGNPAWLN RKIDTDIVVS ATRATSRKPD EIYDIVERLV
GVHSRKLEIF GRDHNTRPGW LTIGNQLQGS FIYETEVKTR YQQYLGTKEG P
|
|---|
| |