| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57529 |
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| Symbol | CDR2 |
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| ID | 4837733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 720015 |
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| End bp | 724382 |
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| Gene Length | 4368 bp |
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| Protein Length | 1455 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389048 |
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| Product | ATP dependent transporter multidrug resistance (SNQ2) |
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| Protein accession | XP_001383771 |
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| Protein GI | 126134493 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.088165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GAAGAAGAAC CCACTGATGA ACAAAGAAGA TTGGAATTGG TCAGAACTGT CACCGAACTT
AACTCCCAGA GTGTGTTAGA CCGTTTAGAA ACTTTATCCA GACAATTGTC GCAACACACT
ACCAGAGATG GTAAGATTGT CATTGACCCC CACGATTTCG ACTTGCACAA GATTTTGGCA
AACTTCGTCT ATCTTGCCTC AAACCAGGGT ATCAGATTGA GACAGTCCGG GATTTCCTTC
AAAGACTTGT CCGTTTTTGG TGTAGATGAA TCCTTTGCTG TTGTCCCAAC TGTGTCTGAA
TTGGCCAAAG GTCCAGTAGG TGCAATCCAG GCTGCAATGG CCAAAAGAAA GGTCCCCGAC
AGAACTATTC TTAACAAACT CAATGGTTTG GCCAGGCCGG GTGAAATGAT TTTAGTGTTG
GGTAGACCAG GAGCTGGTTG TTCATCATTC TTGAAGGCTT TGAGTGGAAC CGATTTTGAC
TTGTTTAAAG GTGTGGAAGG AGACATCAGG TACGACGGTA TAGACCAAAA GACGATGTTG
AAGAACTTCA AGAGTGAGTT GATCTATAAC CCGGAATTGG ATATTCATTT CCCTCACTTA
ACTGTGGAAC AAACTTTGAA GTTTGCTATT GCTTGTAAAA CTCCCAACAT GAGAGTTAAC
GGAGTTTCTC GTGGCCAGTT CATCAATGCC ATGAAGGAAA TTTTAGCTAC TGTATTCGGA
TTGAGACACA CCTATCACAC TAAAGTCGGT AATGATTTCA TAAGAGGTGT CTCTGGTGGT
GAAAGAAAGA GAGTTTCTAT CGCAGAAGCC TTGGCATGCA GAGGTTCCAT TTACTGTTGG
GATAATGCCA CTAGAGGTTT GGATGCCTCA ACTGCCTTGG AGTACGCCAG AGCCATCAGA
ACATCCACTA ATTTGTTGAA AACTACAGCA TTTGTAACTA TTTACCAGGC TGGTGAACAG
ATTTACGAAA CATTTGACAA AGTCACTGTT TTGTATAAGG GAAGACAAGT CTATTTCGGA
CCAATCTTGG AAGCCAAGGC TTACTTCGAG AACATGGGAT GGCAATGCCC TGCCAGACAG
TCTACAGCAG AGTTCTTGAC TGCTATCACC GATCCTTTAG GTAGAACCGC AAAGCCAGGA
TATGAAGACA AGGTACCTTC TACAGCTGAA GACTTCGAAC GTTACTGGTT GAACTCACCA
GAGTACAAGA AGATGATTGA CGAGATTGAA GACTACAACA ATGAAGTCAA TAGTGACGAA
ACCCAAACTA AGTACTACGA ATCGATCAAC CAGGAAAAGA TGAAGTACGC CAGACCACAA
TCCAAATTTA CCATCAGTTT TGTCGAGCAA TTACGATTAA CTACTCTCAG AGGTTTCCAA
AGAATCTGGG GAGACAAAGC TTATACGGTG ACGTTGATTG GGGCTGGTGT CTCACAAGGT
TTGGTTGCTG GTTCACTTTA TTACAACACA CCTGAAACTG TTAGTGGTGC ATTTTCCCGT
GGTGGTGTAG TTTTCTTCGG GGTTTTGTAT GTTTCGTTGA TGGGTTTAGC AGAAGTTTCT
GCATCGTTTG CTAACAGACC AATCTTGATG AAACACAAGA ATTATTCTAT GTATCATCCT
GCCGCCGATG CTGTGGGAAG TTTCATTACG TCTATTCCTG TTGCTTTCTT GGTATCGTTT
TTCTTCTTGA TTATTCTTTA CTTCTTGTCC AACTTGGCCA GAGAAGCAGG TAAGTTCTTC
ACGGCTCTTT TGTTTGTGTT TTTATTGCAG TTGACTATGT CGGCTTTGTT CCAGGCTGTT
GCTTCGTTGA ATAAGACCAT TTCGAGTGCT AATGCCTTTG CGGGTGTTCT TGTTCTTGCT
TCGCTTATGT ACTCGTCTTA CATGATCCAA AGACCTTCAA TGCACCCTTG GTTCAAGTGG
ATTTCCTATA TCAACCCCGT GTTATATGCT TTTGAAGCAG TTGTTGCTAC TGAATTCCAT
GGACGTCATA TGTTGTGTGA TGGACAGTAT TTAGTTCCTA GTGGTCCTGG CTTTGAGAAC
TTGTCTCCTG GTGAACAGGC TTGTTCATTC AAAGGGTCCG TTTTGGGTCA GACTTGGGTT
TTAGGTGACG AATACTTGAA GACAGCTTAT ACTTACAGCT TCAGTCATGT CTGGAGAAAT
TTTGGAATCA TGATTGCCTT CTTGATTTTC TTCGTTACTG TCACTGCTTT AGGTACTGAA
TTTGTAAGAC CCATTACTGG TGGCGGTGAC AGATTATTAT TCTTAAAGGG TAAGGTGCCA
GATCACATTG TTTTGCCTCA GGATAGATCT GCTTCGCCAG ACGATGAAGA AGGTCTCTCT
GGCAAGTACG ACAACGAACT CGGTAGTGAA ACTACTGCCG AGAAGCATGC TAAGAACAAT
GTATTTGAAG ACTTGAAATC GAAAGATATC TTCGTTTGGA AGAACGTTGA CTATGTGATT
CCGTACGACG GTAAGGAGCG TAAGTTGTTA GACGATGTGT CCGGATATTG TATTCCTGGC
ACTTTGACGG CTTTGATGGG TGAATCTGGT GCCGGTAAGA CCACCTTGTT GAACACGTTG
GCTCAACGTA TCGATATGGG TGTTGTTACT GGTGACATGC TTGTCAACGG AAAACCTTTG
GATTTGTCAT TCAGTCGTCG TACTGGGTAT GTGCAACAAC AGGATATCCA TGTCGCGGAA
GTTACTGTGA GAGAATCGTT GAGATTCTCA GCCCGTTTGA GAAGATCCAA CGATATAAGC
GACGCTGAGA AGTTGGAGTA TGTTGAAAAG ATTATCCACG TTTTGAATAT GGAAGACTAC
GCTGATGCTT TGGTAGGTAA GTCAGGTTCT GGTTTGAACG TTGAACAAAG AAAGAAGTTG
TCTATTGGTG TTGAATTGGT TGCAAAGCCT TCCTTATTGT TGTTCTTGGA TGAGCCTACT
TCTGGTTTGG ATTCTCAATC TGCTTGGGCT ATCATAAAGT TGTTGCGTGA TTTGGCCAAC
GCTGGTCAAT CCATCTTGTG TACCATCCAT CAACCTTCTG CTACTTTGTT TGAGGAATTC
GACAGATTGT TGTTGTTAAG AAAGGGTGGT CAGACTGTCT ACTTTGGTGA CATTGGTGAT
CAGTCTAGAG TTATTTTGGA CTACTTCGAA CGTAACGGTG CTAGAAAATG TGGATCTCAA
GAAAACCCTG CTGAATATAT CTTGGAAGCT ATCGGTGCCG GTGCTACTGC CTCCACGGAG
TACAACTGGT TTGATGTTTG GTCTGGCTCT GCAGAGAAGA AAGAAACCGA TAAGGTTCGT
GACCAATTGA TATCTGATTT GGCTTCCAAG CCAAATGACG AATCAGGCTA CACTGCAAGA
GAATTGAACC AAATGAAGAA CCAGTATGCT ACTCCTTACT GGTACCAGTT TTGGTATGTT
CTTGAAAGAA ATGCTTTGAC GTTCTGGAGA GATCCTGAGT ACATTGCTTC TAAGGTCTTC
TTGATGACTA TGTGTGGTTT GTTTATTGGG TTCACTTTCT TTGGCTTGAA GCACACGATG
ACCGGAGCCC AAAATGGTAT GTTCTGTTCT TTCTTAGCTG TCGTTGTATC TGCTCCTGTT
ATCAACCAGA TTCAAGAAAA GGCAATCAAG GGACGTGACT TGTTCGAAGG TAGAGAAAAG
TTGTCTAACA CTTACCACTG GTCATTGATT ATGATTTGTC AGGTAATTGT TGAAATGCCT
TACTTGGTAT TTGGTGCTAC TCTTATGTTC GTCTCTCTTT ACTTCCCCAC CCAAGCTGAT
ACCTCCGGTC CTCATGCTGG TGTCTTCTAC TTGGCACAAG GTATCTTTTT GCAATCGTTT
GTTGTCACAT TTGCCTGTTT GGTTCTTTAC GTGGCACCAG ATTTAGAAAC TGCTGCGGTC
TTGGTTTCTT TCCTTTACAC CTTTATCGTC GCATTCAGTG GTGTTGTGCA GCCGGTGCAT
TTGATGCCCG GTTTCTGGAC CTTTATGCAC AAGGTCTCTC CCTACACCTA TTTCATTCAA
AACTTGGTTG CTTCCTTCTT GCACGGCCGT CCTATTCACT GTAGTGAAAA TGAGCTTGCT
CTCTTCAACC CACCGGAAGG CCAAACCTGT CAAGAGTTTG CTGGTAGCTT TGTTGCAGCC
AGTGGTGGAT ACTTGGACAA TCCAAATGCT ACAACTCAAT GTGGTTTCTG CTCCTTCAGC
AATGCGGACC AGTACTTGTT GACTATTGGA GCCAAGTATT CCTACGTGTG GAGAAACGTT
GGTTTCTTCT GTGTGTACTT CATCTTTAAC ATCGCTCTCG TGTTGTTCCT TTACTACAGT
TTCAGATACA AGAGATTCAA CCCATTTGCT ATCTTTAAGA AGAAGTGA
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| Protein sequence | EEEPTDEQRR LELVRTVTEL NSQSVLDRLE TLSRQLSQHT TRDGKIVIDP HDFDLHKILA
NFVYLASNQG IRLRQSGISF KDLSVFGVDE SFAVVPTVSE LAKGPVGAIQ AAMAKRKVPD
RTILNKLNGL ARPGEMILVL GRPGAGCSSF LKALSGTDFD LFKGVEGDIR YDGIDQKTML
KNFKSELIYN PELDIHFPHL TVEQTLKFAI ACKTPNMRVN GVSRGQFINA MKEILATVFG
LRHTYHTKVG NDFIRGVSGG ERKRVSIAEA LACRGSIYCW DNATRGLDAS TALEYARAIR
TSTNLLKTTA FVTIYQAGEQ IYETFDKVTV LYKGRQVYFG PILEAKAYFE NMGWQCPARQ
STAEFLTAIT DPLGRTAKPG YEDKVPSTAE DFERYWLNSP EYKKMIDEIE DYNNEVNSDE
TQTKYYESIN QEKMKYARPQ SKFTISFVEQ LRLTTLRGFQ RIWGDKAYTV TLIGAGVSQG
LVAGSLYYNT PETVSGAFSR GGVVFFGVLY VSLMGLAEVS ASFANRPILM KHKNYSMYHP
AADAVGSFIT SIPVAFLVSF FFLIILYFLS NLAREAGKFF TALLFVFLLQ LTMSALFQAV
ASLNKTISSA NAFAGVLVLA SLMYSSYMIQ RPSMHPWFKW ISYINPVLYA FEAVVATEFH
GRHMLCDGQY LVPSGPGFEN LSPGEQACSF KGSVLGQTWV LGDEYLKTAY TYSFSHVWRN
FGIMIAFLIF FVTVTALGTE FVRPITGGGD RLLFLKGKVP DHIVLPQDRS ASPDDEEGLS
GKYDNELGSE TTAEKHAKNN VFEDLKSKDI FVWKNVDYVI PYDGKERKLL DDVSGYCIPG
TLTALMGESG AGKTTLLNTL AQRIDMGVVT GDMLVNGKPL DLSFSRRTGY VQQQDIHVAE
VTVRESLRFS ARLRRSNDIS DAEKLEYVEK IIHVLNMEDY ADALVGKSGS GLNVEQRKKL
SIGVELVAKP SLLLFLDEPT SGLDSQSAWA IIKLLRDLAN AGQSILCTIH QPSATLFEEF
DRLLLLRKGG QTVYFGDIGD QSRVILDYFE RNGARKCGSQ ENPAEYILEA IGAGATASTE
YNWFDVWSGS AEKKETDKVR DQLISDLASK PNDESGYTAR ELNQMKNQYA TPYWYQFWYV
LERNALTFWR DPEYIASKVF LMTMCGLFIG FTFFGLKHTM TGAQNGMFCS FLAVVVSAPV
INQIQEKAIK GRDLFEGREK LSNTYHWSLI MICQVIVEMP YLVFGATLMF VSLYFPTQAD
TSGPHAGVFY LAQGIFLQSF VVTFACLVLY VAPDLETAAV LVSFLYTFIV AFSGVVQPVH
LMPGFWTFMH KVSPYTYFIQ NLVASFLHGR PIHCSENELA LFNPPEGQTC QEFAGSFVAA
SGGYLDNPNA TTQCGFCSFS NADQYLLTIG AKYSYVWRNV GFFCVYFIFN IALVLFLYYS
FRYKRFNPFA IFKKK
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