Gene PICST_57474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_57474 
Symbol 
ID4838064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1666315 
End bp1666587 
Gene Length273 bp 
Protein Length90 aa 
Translation table12 
GC content44% 
IMG OID640389379 
Productpredicted protein 
Protein accessionXP_001383942 
Protein GI126134835 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0185] Ribosomal protein S19 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.576492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.012106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCTG CTTTAACGGT CTTGAAGAGA TCTGTATGGA AGGGTCCACA TGTGGTGCCT 
TTGCCCATCG CGGAAGCTAT CAAAAACGGA ACACCCATCA GAACCAACGC CAGAAGTTGT
ACTATTCTTC CTCAGTTTGT AGGCTTGAAA TTCCAGATTC ACAATGGAAA AGAGTATGTG
GAAGTCGAAG TGACCGACAA CATGGTGGGA TCCAAATTGG GTGAGTTTGC TGCCACAAGA
AAGAAGTTCA TGTACAAATA CACCAAGAAT TGA
 
Protein sequence
MRPALTVLKR SVWKGPHVVP LPIAEAIKNG TPIRTNARSC TILPQFVGLK FQIHNGKEYV 
EVEVTDNMVG SKLGEFAATR KKFMYKYTKN