Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57399 |
Symbol | EXG1 |
ID | 4837972 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 537868 |
End bp | 539313 |
Gene Length | 1446 bp |
Protein Length | 458 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640389287 |
Product | exo-1,3-beta-glucanase |
Protein accession | XP_001383379 |
Protein GI | 150864529 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2730] Endoglucanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.514091 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AACATCACCA ACTCCACCAT CCAATCTCAG TACAATTCCA ACAATTTCCA GTACCAGGGC GTAGCCATCG GAGGCTGGCT TGTGCTTGAG CCATATATAA CGCCGTCCTT ATTTCTTGCC TTTAACCAAA CGGCGAACAC CACAGAGAAG GATATTCCCG TGGACGAATA TCACTATTGT AAGAAATTGG GCTACGAGGA AGCTGAGAAA AGACTAACTC AGCATTGGGA CACGTTCTAC ACCGAGAACG ACTTTGCCGA CATCAAGAAT GCCGGCTTGA ACATGGTGCG GATCCCCATT GGATATTGGG CTTTCCAGAA ACTCGATGGC GACCCATATG TTCTGGGAGC CCAGGACTAC TTGGACAAGG CCCTAGAATG GGCCAAAAAC AACGATCTTA AAGTATGGAT CGATTTGCAT GGAGTTCCGG GGTCACAAAA TGGATTTGAC AATTCTGGAT TTAGAGATAT CGGATACCCT GGCTGGTTCA ACAGTACAGA AAACGTGAAC TTGACAAAAC AAGTTCTTCA CCAAATTTAC CACAAATATG GTACTGGAGA GAACGCCATA AATTATAGGG ACACCATTCT CGGTATTGAA GTCGTTAACG AACCCTTCAC TCCAAAGTTG TCGATGTCAA GGTTGCAAAG TTTCTATATA GACACCTACA TTGACTCCAG AAAAACACAG ACTCTCAACA ATACAATCGT CATTCATGAT GGGTTTGAGG GGATTGGCTA TTGGAACGAT TTCCTTGCTG GTGGAAAAGT TTATTCCAAC AGTAGCTATC TCAACAGTAC GAATAGCACA TCCAAATTCC TGAAAAGGGA CAATTACTTC CCATTTAATG CTACAAATAT TACAGCTGTT GCTTCAGCAG AAGTTTTTAA CGTGTTGATT GATCACCACC ATTATGAGGT GTTTGCCTCT TCAGTTGCTT CGAACATCAC GACACATTTG CTGAATATTC GAGGATACAG TCAATCTATC AAGGACGAGT TAAAGTATCA TCCGGCTGTA GTAGGCGAGT GGTCAGCAGC CTTGACTGAC TGTACACCTT GGCTCAATGG AGTCGGCCTA GGAGCTCGAT ACGCAGGAGA AGCACCCTAT GATAACACTA CCAAGGTGGG AAAATGTGAC AACATCAACA ATTTCGACAA ATGGACCAAA CAGCAGAAGA AAAATACCCG GAAATTTATT GAGATACAAT TAGATCAGTA CTCTCGTTAT TCGAACGGGT GGATTTTCTG GTGTTGGAAG ACTGAAACCA CCATCGAATG GGATTTCAAA AAGCTTGTAG AGTTGGACTT GATGCCCCAA CCGCTTAACA ATTTTACGTA TATCGTAAAT GGAACAGATA CAGATCCTGA TAGTGGAGCT TCTCTTGCAA GGCTCAGTTT GTTTATCCCA GTGGCACTGG TCTTGATGTT CGTTGCTTTT TTTTAA
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Protein sequence | NITNSTIQSQ YNSNNFQYQG VAIGGWLVLE PYITPSLFLA FNQTANTTEK DIPVDEYHYC KKLGYEEAEK RLTQHWDTFY TENDFADIKN AGLNMVRIPI GYWAFQKLDG DPYVSGAQDY LDKALEWAKN NDLKVWIDLH GVPGSQNGFD NSGFRDIGYP GWFNSTENVN LTKQVLHQIY HKYGTGENAI NYRDTILGIE VVNEPFTPKL SMSRLQSFYI DTYIDSRKTQ TLNNTIVIHD GFEGIGYWND FLAGGKVYSN SSYLNTVASA EVFNVLIDHH HYEVFASSVA SNITTHLSNI RGYSQSIKDE LKYHPAVVGE WSAALTDCTP WLNGVGLGAR YAGEAPYDNT TKVGKCDNIN NFDKWTKQQK KNTRKFIEIQ LDQYSRYSNG WIFWCWKTET TIEWDFKKLV ELDLMPQPLN NFTYIVNGTD TDPDSGASLA RLSLFIPVAS VLMFVAFF
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