Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57210 |
Symbol | |
ID | 4837891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1829602 |
End bp | 1830594 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389206 |
Product | hypothetical protein |
Protein accession | XP_001383640 |
Protein GI | 126134231 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3435] Gentisate 1,2-dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCAG CTGCTACACC ACGCTCTCAA GAAGCGCAGG AAAATGATGC TTTGTTAAAA AGCATGCCCG CTGAAAACGT CGCTCCATTA TGGAAGATAT TGAAGAAGTT GTCTCCTCCC AAGCCAAACC CAATTTCAGT TCCTCATCTC TGGAACTACA AGAAATTAAA GCCAATCTTA GATGAATCTG GACGTCTTGT TCCAACAGAA CTTGCTGAGA GAAGAGTGCT TATGTTGGTT AATCCAAAGT TAAATGGTCC CCGAACTACT GAAACTTTGT ATGCTGGTCT TCAATATATT AGACCTGGTG AAGTTGCTGC TGCCCATAGA CACGTTGCTT TTGCTCTTAG ATTCATCCTT GAAGGACAAG GAGGTTTCAC TAATGTCGAG GGAACTAGAA TGTCAATGCA AAGAGGTGAC GTACTTTTAA CCCCAAGAAA CTGCTGGCAC GATCATGGTA AGGATGGAAA TGGTCCTATG ATCTGGTTAG ATGGTTTGGA CTTGCCAATG TGGCAATCAA TTCCCGTGAA CTACACTGAT TACTATGAAG AAGACAGATT CCCAGCTGTT GATAATGAAA ACACTCCAAT GAAGTTCCCA TGGCAACCAG TCCAAGACAA GCTTGACAGT ATTAAGGGTG ACTTTGCTAT TTTCGAATAT CGTGACCAGG AAAATCCTGA AAAGTACGTA TCCTCTATAC TTGGCGCTGA AGCCTTGAGA GTTTCTCCAA GTGCTTCTAC TCCTGTCCGT CAAGAAAACA GTTCTTTCGT TTTCTGTGTC TACGAAGGTA AGGGCCATAC TATTGTCTAC GGTGACGACG GTGAAGAGAA TGTTTTCAAC TGGGAAAACA GTGATGTCTT CTGTATTCCT TGTAACATGC CATTCAAGCA CTTTAATGAC AGTGAAGAAC AAGCTTATCT CTTCAACTTC TCGGACACCC CATTGCTCAA AAACTTGAGA ATTCACAGTT CCGACTTGAA GAAGCATAAC TAG
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Protein sequence | MTPAATPRSQ EAQENDALLK SMPAENVAPL WKILKKLSPP KPNPISVPHL WNYKKLKPIL DESGRLVPTE LAERRVLMLV NPKLNGPRTT ETLYAGLQYI RPGEVAAAHR HVAFALRFIL EGQGGFTNVE GTRMSMQRGD VLLTPRNCWH DHGKDGNGPM IWLDGLDLPM WQSIPVNYTD YYEEDRFPAV DNENTPMKFP WQPVQDKLDS IKGDFAIFEY RDQENPEKYV SSILGAEALR VSPSASTPVR QENSSFVFCV YEGKGHTIVY GDDGEENVFN WENSDVFCIP CNMPFKHFND SEEQAYLFNF SDTPLLKNLR IHSSDLKKHN
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