Gene PICST_57210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_57210 
Symbol 
ID4837891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1829602 
End bp1830594 
Gene Length993 bp 
Protein Length330 aa 
Translation table12 
GC content42% 
IMG OID640389206 
Producthypothetical protein 
Protein accessionXP_001383640 
Protein GI126134231 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3435] Gentisate 1,2-dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCAG CTGCTACACC ACGCTCTCAA GAAGCGCAGG AAAATGATGC TTTGTTAAAA 
AGCATGCCCG CTGAAAACGT CGCTCCATTA TGGAAGATAT TGAAGAAGTT GTCTCCTCCC
AAGCCAAACC CAATTTCAGT TCCTCATCTC TGGAACTACA AGAAATTAAA GCCAATCTTA
GATGAATCTG GACGTCTTGT TCCAACAGAA CTTGCTGAGA GAAGAGTGCT TATGTTGGTT
AATCCAAAGT TAAATGGTCC CCGAACTACT GAAACTTTGT ATGCTGGTCT TCAATATATT
AGACCTGGTG AAGTTGCTGC TGCCCATAGA CACGTTGCTT TTGCTCTTAG ATTCATCCTT
GAAGGACAAG GAGGTTTCAC TAATGTCGAG GGAACTAGAA TGTCAATGCA AAGAGGTGAC
GTACTTTTAA CCCCAAGAAA CTGCTGGCAC GATCATGGTA AGGATGGAAA TGGTCCTATG
ATCTGGTTAG ATGGTTTGGA CTTGCCAATG TGGCAATCAA TTCCCGTGAA CTACACTGAT
TACTATGAAG AAGACAGATT CCCAGCTGTT GATAATGAAA ACACTCCAAT GAAGTTCCCA
TGGCAACCAG TCCAAGACAA GCTTGACAGT ATTAAGGGTG ACTTTGCTAT TTTCGAATAT
CGTGACCAGG AAAATCCTGA AAAGTACGTA TCCTCTATAC TTGGCGCTGA AGCCTTGAGA
GTTTCTCCAA GTGCTTCTAC TCCTGTCCGT CAAGAAAACA GTTCTTTCGT TTTCTGTGTC
TACGAAGGTA AGGGCCATAC TATTGTCTAC GGTGACGACG GTGAAGAGAA TGTTTTCAAC
TGGGAAAACA GTGATGTCTT CTGTATTCCT TGTAACATGC CATTCAAGCA CTTTAATGAC
AGTGAAGAAC AAGCTTATCT CTTCAACTTC TCGGACACCC CATTGCTCAA AAACTTGAGA
ATTCACAGTT CCGACTTGAA GAAGCATAAC TAG
 
Protein sequence
MTPAATPRSQ EAQENDALLK SMPAENVAPL WKILKKLSPP KPNPISVPHL WNYKKLKPIL 
DESGRLVPTE LAERRVLMLV NPKLNGPRTT ETLYAGLQYI RPGEVAAAHR HVAFALRFIL
EGQGGFTNVE GTRMSMQRGD VLLTPRNCWH DHGKDGNGPM IWLDGLDLPM WQSIPVNYTD
YYEEDRFPAV DNENTPMKFP WQPVQDKLDS IKGDFAIFEY RDQENPEKYV SSILGAEALR
VSPSASTPVR QENSSFVFCV YEGKGHTIVY GDDGEENVFN WENSDVFCIP CNMPFKHFND
SEEQAYLFNF SDTPLLKNLR IHSSDLKKHN